Gene name: TAN1
Reference locus (S288C): YGL232W
Gene biotype: protein_coding
Description: Putative tRNA acetyltransferase; RNA-binding protein required for the formation of the modified nucleoside N(4)-acetylcytidine in serine and leucine tRNAs but not required for the same modification in 18S rRNA; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): TRM1 (0.925); DPB4 (0.897); SMM1 (0.885); GPN3 (0.872); KRE33 (0.864); PUS1 (0.861); TRM82 (0.813); YGL230C (0.812); PUS7 (0.81); PUS4 (0.784); TRM8 (0.782); HUB1 (0.774); TRM10 (0.764); TRM44 (0.738); PUS5 (0.723); TAD1 (0.715); TRM13 (0.715); TRM3 (0.675); MAF1 (0.674); GPI15 (0.65)
Homologues (species, bitscore): THUMPD1 (Homo sapiens, 78.6); Thumpd1 (Mus musculus, 80.1); thumpd1 (Danio rerio, 76.6); thumpd1 (Xenopus tropicalis, 68.9); CG15014 (Drosophila melanogaster, 64.7); AT5G12410 (Arabidopsis thaliana, 58.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:63610-64537:+ | gene-YGL232W_AKU4011 | rna-NM_001181098.1_AKU4011 | cds-NP_011282.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000175.1:55643-56570:+ | gene-YGL232W_BG1 | rna-NM_001181098.1_BG1 | cds-NP_011282.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:63964-64891:+ | gene-YGL232W_Bruggeman | rna-NM_001181098.1_Bruggeman | cds-NP_011282.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:62031-62958:+ | gene-YGL232W_CAT1 | rna-NM_001181098.1_CAT1 | cds-NP_011282.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:67897-68824:+ | gene-YGL232W_CBS1585 | rna-NM_001181098.1_CBS1585 | cds-NP_011282.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:62616-63543:+ | gene-YGL232W_CBS436 | rna-NM_001181098.1_CBS436 | cds-NP_011282.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:55467-56394:+ | gene-YGL232W_CBS6412 | rna-NM_001181098.1_CBS6412 | cds-NP_011282.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:61757-62684:+ | gene-YGL232W_CBS6413 | rna-NM_001181098.1_CBS6413 | cds-NP_011282.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:61754-62681:+ | gene-YGL232W_CENPK1137D | rna-NM_001181098.1_CENPK1137D | cds-NP_011282.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:54697-55624:+ | gene-YGL232W_EthanolRed | rna-NM_001181098.1_EthanolRed | cds-NP_011282.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:55282-56209:+ | gene-YGL232W_FaliES1 | rna-NM_001181098.1_FaliES1 | cds-NP_011282.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000079.1:10915-11842:- | gene-YGL232W_JAY291 | rna-NM_001181098.1_JAY291 | cds-NP_011282.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:63891-64818:+ | gene-YGL232W_MUCL30387 | rna-NM_001181098.1_MUCL30387 | cds-NP_011282.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:66055-66982:+ | gene-YGL232W_MUCL30388 | rna-NM_001181098.1_MUCL30388 | cds-NP_011282.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:64494-65421:+ | gene-YGL232W_MUCL39482 | rna-NM_001181098.1_MUCL39482 | cds-NP_011282.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:67375-68302:+ | gene-YGL232W_MUCL42920 | rna-NM_001181098.1_MUCL42920 | cds-NP_011282.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:62075-63002:+ | gene-YGL232W_NCIM3186 | rna-NM_001181098.1_NCIM3186 | cds-NP_011282.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:56255-57182:+ | gene-YGL232W_NCYC1407 | rna-NM_001181098.1_NCYC1407 | cds-NP_011282.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:58112-59039:+ | gene-YGL232W_PE2H3 | rna-NM_001181098.1_PE2H3 | cds-NP_011282.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:57660-58587:+ | gene-YGL232W_PE2H4 | rna-NM_001181098.1_PE2H4 | cds-NP_011282.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:62075-63002:+ | gene-YGL232W_S288C | rna-NM_001181098.1_S288C | cds-NP_011282.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:312327-313254:- | gene-YGL232W_SA1 | rna-NM_001181098.1_SA1 | cds-NP_011282.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:55588-56515:+ | gene-YGL232W_ThermosaccDry | rna-NM_001181098.1_ThermosaccDry | cds-NP_011282.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:62546-63473:+ | gene-YGL232W_VR1 | rna-NM_001181098.1_VR1 | cds-NP_011282.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:54632-55559:+ | gene-YGL232W_ZTW1 | rna-NM_001181098.1_ZTW1 | cds-NP_011282.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:63274-64203:+ | gene-YGL232W_Sparadoxus | rna-NM_001181098.1_Sparadoxus | cds-NP_011282.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |