Gene name: TAL1
Reference locus (S288C): YLR354C
Gene biotype: protein_coding
Description: Transaldolase, enzyme in the non-oxidative pentose phosphate pathway; converts sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate to erythrose 4-phosphate and fructose 6-phosphate; TAL1 has a paralog, NQM1, that arose from the whole genome duplication
Top 10 interactors (score): XKS1 (0.999); TKL2 (0.999); RPE1 (0.999); TKL1 (0.999); TPI1 (0.996); PGI1 (0.993); ZWF1 (0.991); FBA1 (0.988); GND1 (0.988); FBP1 (0.984); PFK1 (0.98); GND2 (0.979); RKI1 (0.976); PFK2 (0.974); XYL2 (0.971); YNK1 (0.967); TDH3 (0.966); GRE3 (0.963); CDC19 (0.962); ENO1 (0.961)
Homologues (species, bitscore): TALDO1 (Homo sapiens, 390.6); Taldo1 (Mus musculus, 393.7); taldo1 (Danio rerio, 400.6); taldo1 (Xenopus tropicalis, 374.0); Tal (Drosophila melanogaster, 380.6); Y24D9A.8 (Caenorhabditis elegans, 394.4); AT1G12230 (Arabidopsis thaliana, 168.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:785896-786903:- | gene-YLR354C_AKU4011 | rna-NM_001182243.1_AKU4011 | cds-NP_013458.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:17959-18966:- | gene-YLR354C_BG1 | rna-NM_001182243.1_BG1 | cds-NP_013458.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:824193-825200:- | gene-YLR354C_Bruggeman | rna-NM_001182243.1_Bruggeman | cds-NP_013458.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:819691-820698:- | gene-YLR354C_CAT1 | rna-NM_001182243.1_CAT1 | cds-NP_013458.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:820888-821895:- | gene-YLR354C_CBS1585 | rna-NM_001182243.1_CBS1585 | cds-NP_013458.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:805091-806098:- | gene-YLR354C_CBS436 | rna-NM_001182243.1_CBS436 | cds-NP_013458.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:857895-858902:- | gene-YLR354C_CBS6412 | rna-NM_001182243.1_CBS6412 | cds-NP_013458.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:821778-822785:- | gene-YLR354C_CBS6413 | rna-NM_001182243.1_CBS6413 | cds-NP_013458.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:821052-822059:- | gene-YLR354C_CENPK1137D | rna-NM_001182243.1_CENPK1137D | cds-NP_013458.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:778458-779465:- | gene-YLR354C_EthanolRed | rna-NM_001182243.1_EthanolRed | cds-NP_013458.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:807263-808270:- | gene-YLR354C_FaliES1 | rna-NM_001182243.1_FaliES1 | cds-NP_013458.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000161.1:17832-18839:- | gene-YLR354C_JAY291 | rna-NM_001182243.1_JAY291 | cds-NP_013458.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:821597-822604:- | gene-YLR354C_MUCL30387 | rna-NM_001182243.1_MUCL30387 | cds-NP_013458.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:827226-828233:- | gene-YLR354C_MUCL30388 | rna-NM_001182243.1_MUCL30388 | cds-NP_013458.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:822107-823114:- | gene-YLR354C_MUCL39482 | rna-NM_001182243.1_MUCL39482 | cds-NP_013458.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:817384-818391:- | gene-YLR354C_MUCL42920 | rna-NM_001182243.1_MUCL42920 | cds-NP_013458.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:836324-837331:- | gene-YLR354C_NCIM3186 | rna-NM_001182243.1_NCIM3186 | cds-NP_013458.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:831327-832334:- | gene-YLR354C_NCYC1407 | rna-NM_001182243.1_NCYC1407 | cds-NP_013458.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:818252-819259:- | gene-YLR354C_PE2H3 | rna-NM_001182243.1_PE2H3 | cds-NP_013458.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:817996-819003:- | gene-YLR354C_PE2H4 | rna-NM_001182243.1_PE2H4 | cds-NP_013458.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:836350-837357:- | gene-YLR354C_S288C | rna-NM_001182243.1_S288C | cds-NP_013458.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:211356-212363:+ | gene-YLR354C_SA1 | rna-NM_001182243.1_SA1 | cds-NP_013458.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:810101-811108:- | gene-YLR354C_ThermosaccDry | rna-NM_001182243.1_ThermosaccDry | cds-NP_013458.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:823360-824367:- | gene-YLR354C_VR1 | rna-NM_001182243.1_VR1 | cds-NP_013458.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:147543-148550:- | gene-YLR354C_ZTW1 | rna-NM_001182243.1_ZTW1 | cds-NP_013458.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:796167-797174:- | gene-YLR354C_Sparadoxus | rna-NM_001182243.1_Sparadoxus | cds-NP_013458.1_Sparadoxus | 93.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |