Gene name: TAH11
Reference locus (S288C): YJR046W
Gene biotype: protein_coding
Description: Cell division cycle protein CDT1; DNA replication licensing factor; required for pre-replication complex assembly; Belongs to the Cdt1 family
Top 10 interactors (score): ORC6 (0.999); MCM3 (0.999); ORC3 (0.999); MCM4 (0.999); MCM7 (0.999); MCM2 (0.999); MCM6 (0.999); ORC5 (0.999); CDC6 (0.999); ORC1 (0.998); MCM5 (0.998); ORC2 (0.998); ORC4 (0.988); CDC45 (0.97); IPI3 (0.945); NOC3 (0.941); CDC28 (0.78); CLB5 (0.776); CTF18 (0.766); SLD3 (0.747)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:493740-495554:+ | gene-YJR046W_AKU4011 | rna-NM_001181704.1_AKU4011 | cds-NP_012580.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:117384-119198:- | gene-YJR046W_BG1 | rna-NM_001181704.1_BG1 | cds-NP_012580.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:507789-509603:+ | gene-YJR046W_Bruggeman | rna-NM_001181704.1_Bruggeman | cds-NP_012580.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:511703-513517:+ | gene-YJR046W_CAT1 | rna-NM_001181704.1_CAT1 | cds-NP_012580.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:505320-507134:+ | gene-YJR046W_CBS1585 | rna-NM_001181704.1_CBS1585 | cds-NP_012580.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:524267-526081:+ | gene-YJR046W_CBS436 | rna-NM_001181704.1_CBS436 | cds-NP_012580.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:493525-495339:+ | gene-YJR046W_CBS6412 | rna-NM_001181704.1_CBS6412 | cds-NP_012580.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:495770-497584:+ | gene-YJR046W_CBS6413 | rna-NM_001181704.1_CBS6413 | cds-NP_012580.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:504405-506219:+ | gene-YJR046W_CENPK1137D | rna-NM_001181704.1_CENPK1137D | cds-NP_012580.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:498656-500470:+ | gene-YJR046W_EthanolRed | rna-NM_001181704.1_EthanolRed | cds-NP_012580.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:509873-511687:+ | gene-YJR046W_FaliES1 | rna-NM_001181704.1_FaliES1 | cds-NP_012580.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000250.1:24735-26549:+ | gene-YJR046W_JAY291 | rna-NM_001181704.1_JAY291 | cds-NP_012580.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:508079-509893:+ | gene-YJR046W_MUCL30387 | rna-NM_001181704.1_MUCL30387 | cds-NP_012580.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:504632-506446:+ | gene-YJR046W_MUCL30388 | rna-NM_001181704.1_MUCL30388 | cds-NP_012580.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:498780-500594:+ | gene-YJR046W_MUCL39482 | rna-NM_001181704.1_MUCL39482 | cds-NP_012580.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:504039-505853:+ | gene-YJR046W_MUCL42920 | rna-NM_001181704.1_MUCL42920 | cds-NP_012580.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:522027-523841:+ | gene-YJR046W_NCIM3186 | rna-NM_001181704.1_NCIM3186 | cds-NP_012580.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:496622-498436:+ | gene-YJR046W_NCYC1407 | rna-NM_001181704.1_NCYC1407 | cds-NP_012580.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:514973-516787:+ | gene-YJR046W_PE2H3 | rna-NM_001181704.1_PE2H3 | cds-NP_012580.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:508669-510483:+ | gene-YJR046W_PE2H4 | rna-NM_001181704.1_PE2H4 | cds-NP_012580.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:522048-523862:+ | gene-YJR046W_S288C | rna-NM_001181704.1_S288C | cds-NP_012580.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:306899-308713:+ | gene-YJR046W_SA1 | rna-NM_001181704.1_SA1 | cds-NP_012580.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:503561-505375:+ | gene-YJR046W_ThermosaccDry | rna-NM_001181704.1_ThermosaccDry | cds-NP_012580.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:506052-507866:+ | gene-YJR046W_VR1 | rna-NM_001181704.1_VR1 | cds-NP_012580.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:483450-485264:+ | gene-YJR046W_ZTW1 | rna-NM_001181704.1_ZTW1 | cds-NP_012580.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:509664-511478:+ | gene-YJR046W_Sparadoxus | rna-NM_001181704.1_Sparadoxus | cds-NP_012580.1_Sparadoxus | 87.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |