Gene name: TAH1
Reference locus (S288C): YCR060W
Gene biotype: protein_coding
Description: TPR repeat-containing protein associated with Hsp90; Component of conserved R2TP complex (Rvb1-Rvb2-Tah1-Pih1); R2TP complex interacts with Hsp90 (Hsp82p and Hsc82p) to mediate assembly of large protein complexes such as box C/D snoRNPs and RNA polymerase II; contains a single TPR domain with at least two TPR motifs; plays a role in determining prion variants
Top 10 interactors (score): RVB2 (0.999); RVB1 (0.999); PIH1 (0.999); HSP82 (0.996); HSC82 (0.991); NOP58 (0.955); RSA1 (0.928); SWD1 (0.913); TTI1 (0.908); SBA1 (0.896); BCD1 (0.843); SGT1 (0.836); TEL2 (0.827); CPR6 (0.822); AHA1 (0.815); CDC37 (0.805); NOP56 (0.799); STI1 (0.767); SNU13 (0.752); RNQ1 (0.752)
Homologues (species, bitscore): SGTB (Homo sapiens, 55.5); Rpap3 (Mus musculus, 53.9); stub1 (Danio rerio, 57.4); rpap3 (Xenopus tropicalis, 52.4); Sgt (Drosophila melanogaster, 56.6); sti-1 (Caenorhabditis elegans, 52.4); TPR5 (Arabidopsis thaliana, 55.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:218862-219197:+ | gene-YCR060W_AKU4011 | rna-NM_001178771.1_AKU4011 | cds-NP_009986.1_AKU4011 | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:73060-73395:+ | gene-YCR060W_BG1 | rna-NM_001178771.1_BG1 | cds-NP_009986.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000396.1:931-1266:- | gene-YCR060W_Bruggeman | rna-NM_001178771.1_Bruggeman | cds-NP_009986.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:226190-226525:+ | gene-YCR060W_CAT1 | rna-NM_001178771.1_CAT1 | cds-NP_009986.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:213640-213975:+ | gene-YCR060W_CBS1585 | rna-NM_001178771.1_CBS1585 | cds-NP_009986.1_CBS1585 | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:225532-225867:+ | gene-YCR060W_CBS436 | rna-NM_001178771.1_CBS436 | cds-NP_009986.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:205380-205715:+ | gene-YCR060W_CBS6412 | rna-NM_001178771.1_CBS6412 | cds-NP_009986.1_CBS6412 | 97.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:219757-220092:+ | gene-YCR060W_CBS6413 | rna-NM_001178771.1_CBS6413 | cds-NP_009986.1_CBS6413 | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:223587-223922:+ | gene-YCR060W_CENPK1137D | rna-NM_001178771.1_CENPK1137D | cds-NP_009986.1_CENPK1137D | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:214825-215160:+ | gene-YCR060W_EthanolRed | rna-NM_001178771.1_EthanolRed | cds-NP_009986.1_EthanolRed | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:219990-220325:+ | gene-YCR060W_FaliES1 | rna-NM_001178771.1_FaliES1 | cds-NP_009986.1_FaliES1 | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000014.1:2861-3196:- | gene-YCR060W_JAY291 | rna-NM_001178771.1_JAY291 | cds-NP_009986.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:211801-212136:+ | gene-YCR060W_MUCL30387 | rna-NM_001178771.1_MUCL30387 | cds-NP_009986.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:211179-211514:+ | gene-YCR060W_MUCL30388 | rna-NM_001178771.1_MUCL30388 | cds-NP_009986.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:220213-220548:+ | gene-YCR060W_MUCL39482 | rna-NM_001178771.1_MUCL39482 | cds-NP_009986.1_MUCL39482 | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:216655-216990:+ | gene-YCR060W_MUCL42920 | rna-NM_001178771.1_MUCL42920 | cds-NP_009986.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:224031-224366:+ | gene-YCR060W_NCIM3186 | rna-NM_001178771.1_NCIM3186 | cds-NP_009986.1_NCIM3186 | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:221072-221407:+ | gene-YCR060W_NCYC1407 | rna-NM_001178771.1_NCYC1407 | cds-NP_009986.1_NCYC1407 | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:229745-230080:+ | gene-YCR060W_PE2H3 | rna-NM_001178771.1_PE2H3 | cds-NP_009986.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:224270-224605:+ | gene-YCR060W_PE2H4 | rna-NM_001178771.1_PE2H4 | cds-NP_009986.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:224399-224734:+ | gene-YCR060W_S288C | rna-NM_001178771.1_S288C | cds-NP_009986.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:24293-24628:+ | gene-YCR060W_SA1 | rna-NM_001178771.1_SA1 | cds-NP_009986.1_SA1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:219975-220310:+ | gene-YCR060W_ThermosaccDry | rna-NM_001178771.1_ThermosaccDry | cds-NP_009986.1_ThermosaccDry | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:231243-231578:+ | gene-YCR060W_VR1 | rna-NM_001178771.1_VR1 | cds-NP_009986.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:217794-218129:+ | gene-YCR060W_ZTW1 | rna-NM_001178771.1_ZTW1 | cds-NP_009986.1_ZTW1 | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:251913-252250:+ | gene-YCR060W_Sparadoxus | rna-NM_001178771.1_Sparadoxus | cds-NP_009986.1_Sparadoxus | 87.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |