Gene name: TAF8
Reference locus (S288C): YML114C
Gene biotype: protein_coding
Description: Transcription initiation factor tfiid subunit 8; TFIID subunit (65 kDa); involved in RNA polymerase II transcription initiation
Top 10 interactors (score): SPT15 (0.999); TAF12 (0.999); TAF2 (0.999); TAF3 (0.999); TAF14 (0.999); TAF5 (0.999); TAF6 (0.999); TAF11 (0.999); TAF4 (0.999); TAF9 (0.999); TAF13 (0.999); TAF10 (0.999); TAF1 (0.999); TAF7 (0.999); TFA2 (0.783); SUA7 (0.727); TEF4 (0.707); TOA2 (0.706); SPT7 (0.702); SWI6 (0.683)
Homologues (species, bitscore): TAF8 (Arabidopsis thaliana, 53.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:35742-37274:- | gene-YML114C_AKU4011 | rna-NM_001182476.1_AKU4011 | cds-NP_013593.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:438897-440429:+ | gene-YML114C_BG1 | rna-NM_001182476.1_BG1 | cds-NP_013593.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:42003-43535:- | gene-YML114C_Bruggeman | rna-NM_001182476.1_Bruggeman | cds-NP_013593.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:43562-45094:- | gene-YML114C_CAT1 | rna-NM_001182476.1_CAT1 | cds-NP_013593.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:35739-37271:- | gene-YML114C_CBS1585 | rna-NM_001182476.1_CBS1585 | cds-NP_013593.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:41759-43291:- | gene-YML114C_CBS436 | rna-NM_001182476.1_CBS436 | cds-NP_013593.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:36503-38035:- | gene-YML114C_CBS6412 | rna-NM_001182476.1_CBS6412 | cds-NP_013593.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:34968-36500:- | gene-YML114C_CBS6413 | rna-NM_001182476.1_CBS6413 | cds-NP_013593.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:36558-38090:- | gene-YML114C_CENPK1137D | rna-NM_001182476.1_CENPK1137D | cds-NP_013593.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:36258-37790:- | gene-YML114C_EthanolRed | rna-NM_001182476.1_EthanolRed | cds-NP_013593.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:36534-38066:- | gene-YML114C_FaliES1 | rna-NM_001182476.1_FaliES1 | cds-NP_013593.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:52119-53651:+ | gene-YML114C_JAY291 | rna-NM_001182476.1_JAY291 | cds-NP_013593.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:40482-42014:- | gene-YML114C_MUCL30387 | rna-NM_001182476.1_MUCL30387 | cds-NP_013593.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:43698-45230:- | gene-YML114C_MUCL30388 | rna-NM_001182476.1_MUCL30388 | cds-NP_013593.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:35755-37287:- | gene-YML114C_MUCL39482 | rna-NM_001182476.1_MUCL39482 | cds-NP_013593.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:39922-41454:- | gene-YML114C_MUCL42920 | rna-NM_001182476.1_MUCL42920 | cds-NP_013593.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:41997-43529:- | gene-YML114C_NCIM3186 | rna-NM_001182476.1_NCIM3186 | cds-NP_013593.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:36550-38082:- | gene-YML114C_NCYC1407 | rna-NM_001182476.1_NCYC1407 | cds-NP_013593.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:41991-43523:- | gene-YML114C_PE2H3 | rna-NM_001182476.1_PE2H3 | cds-NP_013593.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:41929-43461:- | gene-YML114C_PE2H4 | rna-NM_001182476.1_PE2H4 | cds-NP_013593.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:42043-43575:- | gene-YML114C_S288C | rna-NM_001182476.1_S288C | cds-NP_013593.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000054.1:33987-35519:- | gene-YML114C_SA1 | rna-NM_001182476.1_SA1 | cds-NP_013593.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:35832-37364:- | gene-YML114C_ThermosaccDry | rna-NM_001182476.1_ThermosaccDry | cds-NP_013593.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:40232-41764:- | gene-YML114C_VR1 | rna-NM_001182476.1_VR1 | cds-NP_013593.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:15313-16845:- | gene-YML114C_ZTW1 | rna-NM_001182476.1_ZTW1 | cds-NP_013593.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:46848-48380:- | gene-YML114C_Sparadoxus | rna-NM_001182476.1_Sparadoxus | cds-NP_013593.1_Sparadoxus | 88.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |