Gene name: TAF10
Reference locus (S288C): YDR167W
Gene biotype: protein_coding
Description: Transcription initiation factor tfiid subunit 10; Subunit (145 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification
Top 10 interactors (score): SPT7 (0.999); TAF7 (0.999); ADA2 (0.999); TAF13 (0.999); TAF1 (0.999); GCN5 (0.999); TAF8 (0.999); SPT15 (0.999); SPT20 (0.999); TRA1 (0.999); SGF73 (0.999); TAF12 (0.999); TAF3 (0.999); TAF14 (0.999); TAF2 (0.999); SGF11 (0.999); NGG1 (0.999); HFI1 (0.999); TAF11 (0.999); TAF5 (0.999)
Homologues (species, bitscore): TAF10 (Homo sapiens, 81.3); Taf10 (Mus musculus, 81.6); taf10 (Danio rerio, 82.0); taf10 (Xenopus tropicalis, 79.3); Taf10b (Drosophila melanogaster, 74.3); taf-10 (Caenorhabditis elegans, 52.4); TAFII15 (Arabidopsis thaliana, 86.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:760745-761365:+ | gene-YDR167W_AKU4011 | rna-NM_001180474.3_AKU4011 | cds-NP_010451.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:365390-366010:- | gene-YDR167W_BG1 | rna-NM_001180474.3_BG1 | cds-NP_010451.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:792242-792862:+ | gene-YDR167W_Bruggeman | rna-NM_001180474.3_Bruggeman | cds-NP_010451.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:779517-780137:+ | gene-YDR167W_CAT1 | rna-NM_001180474.3_CAT1 | cds-NP_010451.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:751112-751732:+ | gene-YDR167W_CBS1585 | rna-NM_001180474.3_CBS1585 | cds-NP_010451.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:777305-777925:+ | gene-YDR167W_CBS436 | rna-NM_001180474.3_CBS436 | cds-NP_010451.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:746562-747182:+ | gene-YDR167W_CBS6412 | rna-NM_001180474.3_CBS6412 | cds-NP_010451.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:775010-775630:+ | gene-YDR167W_CBS6413 | rna-NM_001180474.3_CBS6413 | cds-NP_010451.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:790111-790731:+ | gene-YDR167W_CENPK1137D | rna-NM_001180474.3_CENPK1137D | cds-NP_010451.3_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:760571-761191:+ | gene-YDR167W_EthanolRed | rna-NM_001180474.3_EthanolRed | cds-NP_010451.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:768783-769403:+ | gene-YDR167W_FaliES1 | rna-NM_001180474.3_FaliES1 | cds-NP_010451.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000119.1:12859-13479:- | gene-YDR167W_JAY291 | rna-NM_001180474.3_JAY291 | cds-NP_010451.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:777620-778240:+ | gene-YDR167W_MUCL30387 | rna-NM_001180474.3_MUCL30387 | cds-NP_010451.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:766130-766750:+ | gene-YDR167W_MUCL30388 | rna-NM_001180474.3_MUCL30388 | cds-NP_010451.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:752540-753160:+ | gene-YDR167W_MUCL39482 | rna-NM_001180474.3_MUCL39482 | cds-NP_010451.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:690364-690984:+ | gene-YDR167W_MUCL42920 | rna-NM_001180474.3_MUCL42920 | cds-NP_010451.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:789372-789992:+ | gene-YDR167W_NCIM3186 | rna-NM_001180474.3_NCIM3186 | cds-NP_010451.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:751943-752563:+ | gene-YDR167W_NCYC1407 | rna-NM_001180474.3_NCYC1407 | cds-NP_010451.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:771137-771757:+ | gene-YDR167W_PE2H3 | rna-NM_001180474.3_PE2H3 | cds-NP_010451.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:770442-771062:+ | gene-YDR167W_PE2H4 | rna-NM_001180474.3_PE2H4 | cds-NP_010451.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:789449-790069:+ | gene-YDR167W_S288C | rna-NM_001180474.3_S288C | cds-NP_010451.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:136648-137268:+ | gene-YDR167W_SA1 | rna-NM_001180474.3_SA1 | cds-NP_010451.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:766918-767538:+ | gene-YDR167W_ThermosaccDry | rna-NM_001180474.3_ThermosaccDry | cds-NP_010451.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:781906-782526:+ | gene-YDR167W_VR1 | rna-NM_001180474.3_VR1 | cds-NP_010451.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:29669-30289:+ | gene-YDR167W_ZTW1 | rna-NM_001180474.3_ZTW1 | cds-NP_010451.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:773119-773739:+ | gene-YDR167W_Sparadoxus | rna-NM_001180474.3_Sparadoxus | cds-NP_010451.3_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |