Gene name: TAD3
Reference locus (S288C): YLR316C
Gene biotype: protein_coding
Description: Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad2p that converts adenosine to inosine at the wobble position of several tRNAs; Belongs to the cytidine and deoxycytidylate deaminase family. ADAT3 subfamily
Top 10 interactors (score): TAD2 (0.999); RIB2 (0.977); TRM82 (0.972); FCY1 (0.962); TAD1 (0.959); GCD14 (0.925); GCD10 (0.912); TRM8 (0.905); CDD1 (0.903); TRM112 (0.902); TRM5 (0.894); TRM11 (0.89); DCD1 (0.87); ERV1 (0.864); TRM9 (0.853); TRM1 (0.842); TRM10 (0.842); NCL1 (0.84); TRM7 (0.839); TRM732 (0.839)
Homologues (species, bitscore): ADAT3 (Homo sapiens, 75.5); Adat3 (Mus musculus, 72.0); adat3 (Danio rerio, 77.0); adat3 (Xenopus tropicalis, 67.4); CG10927 (Drosophila melanogaster, 66.6); Y47D3A.14 (Caenorhabditis elegans, 61.2); EMB2820 (Arabidopsis thaliana, 59.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:713717-714809:- | gene-YLR316C_AKU4011 | rna-NM_001182205.1_AKU4011 | cds-NP_013420.2_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:17835-18926:+ | gene-YLR316C_BG1 | rna-NM_001182205.1_BG1 | cds-NP_013420.2_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:749548-750640:- | gene-YLR316C_Bruggeman | rna-NM_001182205.1_Bruggeman | cds-NP_013420.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:747718-748809:- | gene-YLR316C_CAT1 | rna-NM_001182205.1_CAT1 | cds-NP_013420.2_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:748644-749736:- | gene-YLR316C_CBS1585 | rna-NM_001182205.1_CBS1585 | cds-NP_013420.2_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:733242-734333:- | gene-YLR316C_CBS436 | rna-NM_001182205.1_CBS436 | cds-NP_013420.2_CBS436 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:711284-712376:- | gene-YLR316C_CBS6412 | rna-NM_001182205.1_CBS6412 | cds-NP_013420.2_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:749305-750397:- | gene-YLR316C_CBS6413 | rna-NM_001182205.1_CBS6413 | cds-NP_013420.2_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:749884-750976:- | gene-YLR316C_CENPK1137D | rna-NM_001182205.1_CENPK1137D | cds-NP_013420.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:706996-708088:- | gene-YLR316C_EthanolRed | rna-NM_001182205.1_EthanolRed | cds-NP_013420.2_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:736196-737288:- | gene-YLR316C_FaliES1 | rna-NM_001182205.1_FaliES1 | cds-NP_013420.2_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000296.1:30553-31644:+ | gene-YLR316C_JAY291 | rna-NM_001182205.1_JAY291 | cds-NP_013420.2_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:748777-749869:- | gene-YLR316C_MUCL30387 | rna-NM_001182205.1_MUCL30387 | cds-NP_013420.2_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:754360-755452:- | gene-YLR316C_MUCL30388 | rna-NM_001182205.1_MUCL30388 | cds-NP_013420.2_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:749873-750965:- | gene-YLR316C_MUCL39482 | rna-NM_001182205.1_MUCL39482 | cds-NP_013420.2_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:745026-746118:- | gene-YLR316C_MUCL42920 | rna-NM_001182205.1_MUCL42920 | cds-NP_013420.2_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:765240-766332:- | gene-YLR316C_NCIM3186 | rna-NM_001182205.1_NCIM3186 | cds-NP_013420.2_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:759215-760307:- | gene-YLR316C_NCYC1407 | rna-NM_001182205.1_NCYC1407 | cds-NP_013420.2_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:747009-748100:- | gene-YLR316C_PE2H3 | rna-NM_001182205.1_PE2H3 | cds-NP_013420.2_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:746753-747844:- | gene-YLR316C_PE2H4 | rna-NM_001182205.1_PE2H4 | cds-NP_013420.2_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:765266-766358:- | gene-YLR316C_S288C | rna-NM_001182205.1_S288C | cds-NP_013420.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:17942-19033:+ | gene-YLR316C_SA1 | rna-NM_001182205.1_SA1 | cds-NP_013420.2_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:738090-739182:- | gene-YLR316C_ThermosaccDry | rna-NM_001182205.1_ThermosaccDry | cds-NP_013420.2_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:750226-751317:- | gene-YLR316C_VR1 | rna-NM_001182205.1_VR1 | cds-NP_013420.2_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:76511-77602:- | gene-YLR316C_ZTW1 | rna-NM_001182205.1_ZTW1 | cds-NP_013420.2_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:724259-725356:- | gene-YLR316C_Sparadoxus | rna-NM_001182205.1_Sparadoxus | cds-NP_013420.2_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |