Gene name: TAD2
Reference locus (S288C): YJL035C
Gene biotype: protein_coding
Description: Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad3p that converts adenosine to inosine at the wobble position of several tRNAs; Belongs to the cytidine and deoxycytidylate deaminase family. ADAT2 subfamily
Top 10 interactors (score): TAD3 (0.999); TAD1 (0.962); GCD14 (0.957); TRM82 (0.945); GCD10 (0.924); TRM8 (0.908); CDD1 (0.9); TRM112 (0.9); TRM5 (0.891); RIB2 (0.858); ERV1 (0.858); DCD1 (0.852); TRM11 (0.836); TRM732 (0.815); SUA5 (0.804); DEG1 (0.797); FCY1 (0.787); BUD23 (0.768); TFB1 (0.764); RFA1 (0.752)
Homologues (species, bitscore): ADAT2 (Homo sapiens, 124.4); Adat2 (Mus musculus, 125.6); adat2 (Danio rerio, 107.5); adat2 (Xenopus tropicalis, 113.6); CG5292 (Drosophila melanogaster, 101.3); CELE_JC8.4 (Caenorhabditis elegans, 100.5); emb2191 (Arabidopsis thaliana, 119.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:363206-363958:- | gene-YJL035C_AKU4011 | rna-NM_001181469.1_AKU4011 | cds-NP_012499.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:250124-250876:+ | gene-YJL035C_BG1 | rna-NM_001181469.1_BG1 | cds-NP_012499.1_BG1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:377397-378149:- | gene-YJL035C_Bruggeman | rna-NM_001181469.1_Bruggeman | cds-NP_012499.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:381356-382108:- | gene-YJL035C_CAT1 | rna-NM_001181469.1_CAT1 | cds-NP_012499.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:374870-375622:- | gene-YJL035C_CBS1585 | rna-NM_001181469.1_CBS1585 | cds-NP_012499.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:393227-393979:- | gene-YJL035C_CBS436 | rna-NM_001181469.1_CBS436 | cds-NP_012499.1_CBS436 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:363468-364220:- | gene-YJL035C_CBS6412 | rna-NM_001181469.1_CBS6412 | cds-NP_012499.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:365348-366100:- | gene-YJL035C_CBS6413 | rna-NM_001181469.1_CBS6413 | cds-NP_012499.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:362675-363427:- | gene-YJL035C_CENPK1137D | rna-NM_001181469.1_CENPK1137D | cds-NP_012499.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:366422-367174:- | gene-YJL035C_EthanolRed | rna-NM_001181469.1_EthanolRed | cds-NP_012499.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:378870-379622:- | gene-YJL035C_FaliES1 | rna-NM_001181469.1_FaliES1 | cds-NP_012499.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000200.1:35806-36558:+ | gene-YJL035C_JAY291 | rna-NM_001181469.1_JAY291 | cds-NP_012499.1_JAY291 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:377638-378390:- | gene-YJL035C_MUCL30387 | rna-NM_001181469.1_MUCL30387 | cds-NP_012499.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:373786-374538:- | gene-YJL035C_MUCL30388 | rna-NM_001181469.1_MUCL30388 | cds-NP_012499.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:368194-368946:- | gene-YJL035C_MUCL39482 | rna-NM_001181469.1_MUCL39482 | cds-NP_012499.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:373529-374281:- | gene-YJL035C_MUCL42920 | rna-NM_001181469.1_MUCL42920 | cds-NP_012499.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:380228-380980:- | gene-YJL035C_NCIM3186 | rna-NM_001181469.1_NCIM3186 | cds-NP_012499.1_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:366143-366895:- | gene-YJL035C_NCYC1407 | rna-NM_001181469.1_NCYC1407 | cds-NP_012499.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:378220-378972:- | gene-YJL035C_PE2H3 | rna-NM_001181469.1_PE2H3 | cds-NP_012499.1_PE2H3 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:377864-378616:- | gene-YJL035C_PE2H4 | rna-NM_001181469.1_PE2H4 | cds-NP_012499.1_PE2H4 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:380249-381001:- | gene-YJL035C_S288C | rna-NM_001181469.1_S288C | cds-NP_012499.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:175750-176502:- | gene-YJL035C_SA1 | rna-NM_001181469.1_SA1 | cds-NP_012499.1_SA1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:372531-373283:- | gene-YJL035C_ThermosaccDry | rna-NM_001181469.1_ThermosaccDry | cds-NP_012499.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:374376-375128:- | gene-YJL035C_VR1 | rna-NM_001181469.1_VR1 | cds-NP_012499.1_VR1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:353195-353947:- | gene-YJL035C_ZTW1 | rna-NM_001181469.1_ZTW1 | cds-NP_012499.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:378462-379214:- | gene-YJL035C_Sparadoxus | rna-NM_001181469.1_Sparadoxus | cds-NP_012499.1_Sparadoxus | 90.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |