Gene name: TAD1
Reference locus (S288C): YGL243W
Gene biotype: protein_coding
Description: tRNA-specific adenosine deaminase; deaminates adenosine-37 to inosine in tRNA-Ala; Belongs to the ADAT1 family
Top 10 interactors (score): TAD2 (0.962); TAD3 (0.959); TRM5 (0.918); RIB2 (0.891); CDD1 (0.889); AAH1 (0.868); TRM12 (0.863); ERV1 (0.856); DCD1 (0.852); RNT1 (0.849); DML1 (0.843); FCY1 (0.838); TPP1 (0.82); ECM32 (0.796); TRM7 (0.787); ADI1 (0.78); NCL1 (0.776); TRM10 (0.775); TRM82 (0.775); TRM11 (0.772)
Homologues (species, bitscore): ADAR (Homo sapiens, 58.9); Adarb1 (Mus musculus, 61.6); adarb1a (Danio rerio, 64.3); adarb1 (Xenopus tropicalis, 63.9); adat (Drosophila melanogaster, 77.8); adr-2 (Caenorhabditis elegans, 53.9); AT1G01760 (Arabidopsis thaliana, 73.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:44828-46030:+ | gene-YGL243W_AKU4011 | rna-NM_001181109.1_AKU4011 | cds-NP_011271.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000175.1:36870-38072:+ | gene-YGL243W_BG1 | rna-NM_001181109.1_BG1 | cds-NP_011271.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:45186-46388:+ | gene-YGL243W_Bruggeman | rna-NM_001181109.1_Bruggeman | cds-NP_011271.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:43258-44460:+ | gene-YGL243W_CAT1 | rna-NM_001181109.1_CAT1 | cds-NP_011271.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:49116-50318:+ | gene-YGL243W_CBS1585 | rna-NM_001181109.1_CBS1585 | cds-NP_011271.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:43847-45049:+ | gene-YGL243W_CBS436 | rna-NM_001181109.1_CBS436 | cds-NP_011271.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:36685-37887:+ | gene-YGL243W_CBS6412 | rna-NM_001181109.1_CBS6412 | cds-NP_011271.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:42972-44174:+ | gene-YGL243W_CBS6413 | rna-NM_001181109.1_CBS6413 | cds-NP_011271.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:42967-44169:+ | gene-YGL243W_CENPK1137D | rna-NM_001181109.1_CENPK1137D | cds-NP_011271.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:36108-37268:+ | gene-YGL243W_EthanolRed | rna-NM_001181109.1_EthanolRed | cds-NP_011271.1_EthanolRed | 88.9 | 94.3 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:36469-37671:+ | gene-YGL243W_FaliES1 | rna-NM_001181109.1_FaliES1 | cds-NP_011271.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000079.1:29410-30612:- | gene-YGL243W_JAY291 | rna-NM_001181109.1_JAY291 | cds-NP_011271.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:45124-46326:+ | gene-YGL243W_MUCL30387 | rna-NM_001181109.1_MUCL30387 | cds-NP_011271.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:47276-48478:+ | gene-YGL243W_MUCL30388 | rna-NM_001181109.1_MUCL30388 | cds-NP_011271.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:45713-46915:+ | gene-YGL243W_MUCL39482 | rna-NM_001181109.1_MUCL39482 | cds-NP_011271.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:48609-49811:+ | gene-YGL243W_MUCL42920 | rna-NM_001181109.1_MUCL42920 | cds-NP_011271.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:43307-44509:+ | gene-YGL243W_NCIM3186 | rna-NM_001181109.1_NCIM3186 | cds-NP_011271.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:37477-38679:+ | gene-YGL243W_NCYC1407 | rna-NM_001181109.1_NCYC1407 | cds-NP_011271.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:39336-40538:+ | gene-YGL243W_PE2H3 | rna-NM_001181109.1_PE2H3 | cds-NP_011271.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:38884-40086:+ | gene-YGL243W_PE2H4 | rna-NM_001181109.1_PE2H4 | cds-NP_011271.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:43307-44509:+ | gene-YGL243W_S288C | rna-NM_001181109.1_S288C | cds-NP_011271.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:330826-332028:- | gene-YGL243W_SA1 | rna-NM_001181109.1_SA1 | cds-NP_011271.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:36784-37986:+ | gene-YGL243W_ThermosaccDry | rna-NM_001181109.1_ThermosaccDry | cds-NP_011271.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:43773-44975:+ | gene-YGL243W_VR1 | rna-NM_001181109.1_VR1 | cds-NP_011271.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:35854-37056:+ | gene-YGL243W_ZTW1 | rna-NM_001181109.1_ZTW1 | cds-NP_011271.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:44560-45761:+ | gene-YGL243W_Sparadoxus | rna-NM_001181109.1_Sparadoxus | cds-NP_011271.1_Sparadoxus | 87.1 | 99.9 | Verified | 1 | 1 | 0 | False | False | True | False | False |