Gene name: SYP1
Reference locus (S288C): YCR030C
Gene biotype: protein_coding
Description: Suppressor of yeast profilin deletion; Negative regulator of WASP-Arp23 complex; involved in endocytic site formation; directly inhibits Las17p stimulation of Arp23 complex-mediated actin assembly in vitro; may regulate assembly and disassembly of the septin ring; colocalizes and interacts with septin subunits; potential role in actin cytoskeletal organization
Top 10 interactors (score): EDE1 (0.984); APS2 (0.879); APM4 (0.854); APL3 (0.837); SLA1 (0.832); CLC1 (0.801); YAP1801 (0.801); END3 (0.791); CHC1 (0.79); ARP2 (0.777); BZZ1 (0.774); PAN1 (0.726); SLA2 (0.721); YAP1802 (0.715); PRK1 (0.714); SNC1 (0.714); CDC10 (0.695); MID2 (0.68); ARC15 (0.661); ARP3 (0.656)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:167290-169902:- | gene-YCR030C_AKU4011 | rna-NM_001178744.1_AKU4011 | cds-NP_009959.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:21785-24397:- | gene-YCR030C_BG1 | rna-NM_001178744.1_BG1 | cds-NP_009959.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:163580-166192:- | gene-YCR030C_Bruggeman | rna-NM_001178744.1_Bruggeman | cds-NP_009959.2_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:174722-177334:- | gene-YCR030C_CAT1 | rna-NM_001178744.1_CAT1 | cds-NP_009959.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:162051-164663:- | gene-YCR030C_CBS1585 | rna-NM_001178744.1_CBS1585 | cds-NP_009959.2_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:173698-176310:- | gene-YCR030C_CBS436 | rna-NM_001178744.1_CBS436 | cds-NP_009959.2_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:155904-158516:- | gene-YCR030C_CBS6412 | rna-NM_001178744.1_CBS6412 | cds-NP_009959.2_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:168228-170840:- | gene-YCR030C_CBS6413 | rna-NM_001178744.1_CBS6413 | cds-NP_009959.2_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:173167-175779:- | gene-YCR030C_CENPK1137D | rna-NM_001178744.1_CENPK1137D | cds-NP_009959.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:165051-167663:- | gene-YCR030C_EthanolRed | rna-NM_001178744.1_EthanolRed | cds-NP_009959.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:168167-170779:- | gene-YCR030C_FaliES1 | rna-NM_001178744.1_FaliES1 | cds-NP_009959.2_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000102.1:4445-7057:- | gene-YCR030C_JAY291 | rna-NM_001178744.1_JAY291 | cds-NP_009959.2_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:160817-163429:- | gene-YCR030C_MUCL30387 | rna-NM_001178744.1_MUCL30387 | cds-NP_009959.2_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:160606-163218:- | gene-YCR030C_MUCL30388 | rna-NM_001178744.1_MUCL30388 | cds-NP_009959.2_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:168375-170987:- | gene-YCR030C_MUCL39482 | rna-NM_001178744.1_MUCL39482 | cds-NP_009959.2_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:166169-168781:- | gene-YCR030C_MUCL42920 | rna-NM_001178744.1_MUCL42920 | cds-NP_009959.2_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:173458-176070:- | gene-YCR030C_NCIM3186 | rna-NM_001178744.1_NCIM3186 | cds-NP_009959.2_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:170138-172750:- | gene-YCR030C_NCYC1407 | rna-NM_001178744.1_NCYC1407 | cds-NP_009959.2_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:179184-181796:- | gene-YCR030C_PE2H3 | rna-NM_001178744.1_PE2H3 | cds-NP_009959.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:173805-176417:- | gene-YCR030C_PE2H4 | rna-NM_001178744.1_PE2H4 | cds-NP_009959.2_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:173826-176438:- | gene-YCR030C_S288C | rna-NM_001178744.1_S288C | cds-NP_009959.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000083.1:21332-23944:- | gene-YCR030C_SA1 | rna-NM_001178744.1_SA1 | cds-NP_009959.2_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:168943-171555:- | gene-YCR030C_ThermosaccDry | rna-NM_001178744.1_ThermosaccDry | cds-NP_009959.2_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:179960-182572:- | gene-YCR030C_VR1 | rna-NM_001178744.1_VR1 | cds-NP_009959.2_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:167201-169813:- | gene-YCR030C_ZTW1 | rna-NM_001178744.1_ZTW1 | cds-NP_009959.2_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:201325-203937:- | gene-YCR030C_Sparadoxus | rna-NM_001178744.1_Sparadoxus | cds-NP_009959.2_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |