Gene name: SYN8
Reference locus (S288C): YAL014C
Gene biotype: protein_coding
Description: Syntaxin-8; Endosomal SNARE related to mammalian syntaxin 8; Belongs to the syntaxin family
Top 10 interactors (score): VTI1 (0.983); VAM3 (0.964); YKT6 (0.953); PEP12 (0.931); SNC1 (0.924); VAM7 (0.92); PKC1 (0.9); TLG1 (0.882); TLG2 (0.861); SSO1 (0.86); SNC2 (0.855); NYV1 (0.851); ENT3 (0.76); SFT1 (0.736); SEC9 (0.726); SEC18 (0.7); SEC22 (0.7); YBR053C (0.699); SEC17 (0.653); VPS45 (0.652)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:113364-114131:- | gene-YAL014C_AKU4011 | rna-NM_001178159.1_AKU4011 | cds-NP_009388.2_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:100314-101081:- | gene-YAL014C_BG1 | rna-NM_001178159.1_BG1 | cds-NP_009388.2_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:128237-129004:- | gene-YAL014C_Bruggeman | rna-NM_001178159.1_Bruggeman | cds-NP_009388.2_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:114573-115340:- | gene-YAL014C_CAT1 | rna-NM_001178159.1_CAT1 | cds-NP_009388.2_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:126376-127143:- | gene-YAL014C_CBS1585 | rna-NM_001178159.1_CBS1585 | cds-NP_009388.2_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:126654-127421:- | gene-YAL014C_CBS436 | rna-NM_001178159.1_CBS436 | cds-NP_009388.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:739470-740237:- | gene-YAL014C_CBS6412 | rna-NM_001178159.1_CBS6412 | cds-NP_009388.2_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:124646-125413:- | gene-YAL014C_CBS6413 | rna-NM_001178159.1_CBS6413 | cds-NP_009388.2_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:128412-129179:- | gene-YAL014C_CENPK1137D | rna-NM_001178159.1_CENPK1137D | cds-NP_009388.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:114783-115550:- | gene-YAL014C_EthanolRed | rna-NM_001178159.1_EthanolRed | cds-NP_009388.2_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:129410-130177:- | gene-YAL014C_FaliES1 | rna-NM_001178159.1_FaliES1 | cds-NP_009388.2_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:100682-101449:- | gene-YAL014C_JAY291 | rna-NM_001178159.1_JAY291 | cds-NP_009388.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:129390-130157:- | gene-YAL014C_MUCL30387 | rna-NM_001178159.1_MUCL30387 | cds-NP_009388.2_MUCL30387 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:126637-127404:- | gene-YAL014C_MUCL30388 | rna-NM_001178159.1_MUCL30388 | cds-NP_009388.2_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:125158-125925:- | gene-YAL014C_MUCL39482 | rna-NM_001178159.1_MUCL39482 | cds-NP_009388.2_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:127539-128306:- | gene-YAL014C_MUCL42920 | rna-NM_001178159.1_MUCL42920 | cds-NP_009388.2_MUCL42920 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:128129-128896:- | gene-YAL014C_NCIM3186 | rna-NM_001178159.1_NCIM3186 | cds-NP_009388.2_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:113041-113808:- | gene-YAL014C_NCYC1407 | rna-NM_001178159.1_NCYC1407 | cds-NP_009388.2_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:114970-115737:- | gene-YAL014C_PE2H3 | rna-NM_001178159.1_PE2H3 | cds-NP_009388.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:114689-115456:- | gene-YAL014C_PE2H4 | rna-NM_001178159.1_PE2H4 | cds-NP_009388.2_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:128252-129019:- | gene-YAL014C_S288C | rna-NM_001178159.1_S288C | cds-NP_009388.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000077.1:45174-45941:- | gene-YAL014C_SA1 | rna-NM_001178159.1_SA1 | cds-NP_009388.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:128902-129669:- | gene-YAL014C_ThermosaccDry | rna-NM_001178159.1_ThermosaccDry | cds-NP_009388.2_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:130212-130979:- | gene-YAL014C_VR1 | rna-NM_001178159.1_VR1 | cds-NP_009388.2_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:100730-101497:- | gene-YAL014C_ZTW1 | rna-NM_001178159.1_ZTW1 | cds-NP_009388.2_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:118227-118973:- | gene-YAL014C_Sparadoxus | rna-NM_001178159.1_Sparadoxus | cds-NP_009388.2_Sparadoxus | 87.5 | 97.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |