Gene name: SYG1
Reference locus (S288C): YIL047C
Gene biotype: protein_coding
Description: Xenotropic and polytropic retrovirus receptor 1; Plasma membrane protein of unknown function; truncation and overexpression suppresses lethality of G-alpha protein deficiency
Top 10 interactors (score): PHO81 (0.926); PHO90 (0.759); PHO87 (0.745); PHO89 (0.709); PHO91 (0.704); GPA1 (0.68); VTC4 (0.674); MCY1 (0.642); VTC3 (0.633); STE4 (0.614); PAA1 (0.594); VTC2 (0.585); DRS2 (0.58); MET12 (0.536); MTD1 (0.531); FOL1 (0.515); RIC1 (0.5); YIP3 (0.495); MET13 (0.485); YKR051W (0.478)
Homologues (species, bitscore): XPR1 (Homo sapiens, 173.3); Xpr1 (Mus musculus, 173.3); xpr1 (Danio rerio, 177.9); xpr1 (Xenopus tropicalis, 173.3); CG7536 (Drosophila melanogaster, 174.1); Y39A1A.22 (Caenorhabditis elegans, 127.1); PHO1;H1 (Arabidopsis thaliana, 179.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:261948-264656:- | gene-YIL047C_AKU4011 | rna-NM_001179397.3_AKU4011 | cds-NP_012217.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:123379-126087:- | gene-YIL047C_BG1 | rna-NM_001179397.3_BG1 | cds-NP_012217.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:268203-270911:- | gene-YIL047C_Bruggeman | rna-NM_001179397.3_Bruggeman | cds-NP_012217.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:256114-258822:- | gene-YIL047C_CAT1 | rna-NM_001179397.3_CAT1 | cds-NP_012217.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:261773-264481:- | gene-YIL047C_CBS1585 | rna-NM_001179397.3_CBS1585 | cds-NP_012217.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:257077-259785:- | gene-YIL047C_CBS436 | rna-NM_001179397.3_CBS436 | cds-NP_012217.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:258388-261096:- | gene-YIL047C_CBS6412 | rna-NM_001179397.3_CBS6412 | cds-NP_012217.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:253939-256647:- | gene-YIL047C_CBS6413 | rna-NM_001179397.3_CBS6413 | cds-NP_012217.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:256828-259536:- | gene-YIL047C_CENPK1137D | rna-NM_001179397.3_CENPK1137D | cds-NP_012217.3_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:245862-248570:- | gene-YIL047C_EthanolRed | rna-NM_001179397.3_EthanolRed | cds-NP_012217.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:263401-266109:- | gene-YIL047C_FaliES1 | rna-NM_001179397.3_FaliES1 | cds-NP_012217.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:32766-35474:+ | gene-YIL047C_JAY291 | rna-NM_001179397.3_JAY291 | cds-NP_012217.3_JAY291 | 99.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:265091-267761:- | gene-YIL047C_MUCL30387 | rna-NM_001179397.3_MUCL30387 | cds-NP_012217.3_MUCL30387 | 98.3 | 98.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:261694-264363:- | gene-YIL047C_MUCL30388 | rna-NM_001179397.3_MUCL30388 | cds-NP_012217.3_MUCL30388 | 98.1 | 98.5 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:262616-265324:- | gene-YIL047C_MUCL39482 | rna-NM_001179397.3_MUCL39482 | cds-NP_012217.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:265747-268455:- | gene-YIL047C_MUCL42920 | rna-NM_001179397.3_MUCL42920 | cds-NP_012217.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:265115-267823:- | gene-YIL047C_NCIM3186 | rna-NM_001179397.3_NCIM3186 | cds-NP_012217.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:266889-269597:- | gene-YIL047C_NCYC1407 | rna-NM_001179397.3_NCYC1407 | cds-NP_012217.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:260127-262835:- | gene-YIL047C_PE2H3 | rna-NM_001179397.3_PE2H3 | cds-NP_012217.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:254847-257555:- | gene-YIL047C_PE2H4 | rna-NM_001179397.3_PE2H4 | cds-NP_012217.3_PE2H4 | 99.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:265115-267823:- | gene-YIL047C_S288C | rna-NM_001179397.3_S288C | cds-NP_012217.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:58349-61057:+ | gene-YIL047C_SA1 | rna-NM_001179397.3_SA1 | cds-NP_012217.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:262070-264778:- | gene-YIL047C_ThermosaccDry | rna-NM_001179397.3_ThermosaccDry | cds-NP_012217.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:259243-261951:- | gene-YIL047C_VR1 | rna-NM_001179397.3_VR1 | cds-NP_012217.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:235913-238621:- | gene-YIL047C_ZTW1 | rna-NM_001179397.3_ZTW1 | cds-NP_012217.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:258036-260744:- | gene-YIL047C_Sparadoxus | rna-NM_001179397.3_Sparadoxus | cds-NP_012217.3_Sparadoxus | 91.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |