Gene name: SWS2
Reference locus (S288C): YNL081C
Gene biotype: protein_coding
Description: Putative mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency; localizes to vacuole in response to H2O2
Top 10 interactors (score): RPS15 (0.998); RPS2 (0.998); RPL5 (0.998); RPL28 (0.997); RPL3 (0.997); RPL30 (0.997); RPS13 (0.997); RPL10 (0.996); RPL38 (0.996); RPL29 (0.996); RPS20 (0.996); RPP0 (0.996); RPL25 (0.996); RPL39 (0.995); RPS12 (0.995); ASC1 (0.995); RPS31 (0.995); RPS3 (0.994); MRPL23 (0.994); MRPL38 (0.993)
Homologues (species, bitscore): EMB3137 (Arabidopsis thaliana, 53.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:469845-470276:- | gene-YNL081C_AKU4011 | rna-NM_001182919.3_AKU4011 | cds-NP_014318.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:373918-374349:- | gene-YNL081C_BG1 | rna-NM_001182919.3_BG1 | cds-NP_014318.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:480566-480997:- | gene-YNL081C_Bruggeman | rna-NM_001182919.3_Bruggeman | cds-NP_014318.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:523579-524010:- | gene-YNL081C_CAT1 | rna-NM_001182919.3_CAT1 | cds-NP_014318.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:470515-470946:- | gene-YNL081C_CBS1585 | rna-NM_001182919.3_CBS1585 | cds-NP_014318.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:538894-539325:- | gene-YNL081C_CBS436 | rna-NM_001182919.3_CBS436 | cds-NP_014318.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:465611-466042:- | gene-YNL081C_CBS6412 | rna-NM_001182919.3_CBS6412 | cds-NP_014318.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:466927-467358:- | gene-YNL081C_CBS6413 | rna-NM_001182919.3_CBS6413 | cds-NP_014318.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:470011-470442:- | gene-YNL081C_CENPK1137D | rna-NM_001182919.3_CENPK1137D | cds-NP_014318.3_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:472671-473102:- | gene-YNL081C_EthanolRed | rna-NM_001182919.3_EthanolRed | cds-NP_014318.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:463200-463631:- | gene-YNL081C_FaliES1 | rna-NM_001182919.3_FaliES1 | cds-NP_014318.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000317.1:9967-10398:+ | gene-YNL081C_JAY291 | rna-NM_001182919.3_JAY291 | cds-NP_014318.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:476743-477174:- | gene-YNL081C_MUCL30387 | rna-NM_001182919.3_MUCL30387 | cds-NP_014318.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:512115-512546:- | gene-YNL081C_MUCL30388 | rna-NM_001182919.3_MUCL30388 | cds-NP_014318.3_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:467919-468350:- | gene-YNL081C_MUCL39482 | rna-NM_001182919.3_MUCL39482 | cds-NP_014318.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:471846-472277:- | gene-YNL081C_MUCL42920 | rna-NM_001182919.3_MUCL42920 | cds-NP_014318.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:476157-476588:- | gene-YNL081C_NCIM3186 | rna-NM_001182919.3_NCIM3186 | cds-NP_014318.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:469967-470398:- | gene-YNL081C_NCYC1407 | rna-NM_001182919.3_NCYC1407 | cds-NP_014318.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:473206-473637:- | gene-YNL081C_PE2H3 | rna-NM_001182919.3_PE2H3 | cds-NP_014318.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:468281-468712:- | gene-YNL081C_PE2H4 | rna-NM_001182919.3_PE2H4 | cds-NP_014318.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:476188-476619:- | gene-YNL081C_S288C | rna-NM_001182919.3_S288C | cds-NP_014318.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:61143-61574:- | gene-YNL081C_SA1 | rna-NM_001182919.3_SA1 | cds-NP_014318.3_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:464075-464506:- | gene-YNL081C_ThermosaccDry | rna-NM_001182919.3_ThermosaccDry | cds-NP_014318.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:483188-483619:- | gene-YNL081C_VR1 | rna-NM_001182919.3_VR1 | cds-NP_014318.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:373424-373855:- | gene-YNL081C_ZTW1 | rna-NM_001182919.3_ZTW1 | cds-NP_014318.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:479590-480021:- | gene-YNL081C_Sparadoxus | rna-NM_001182919.3_Sparadoxus | cds-NP_014318.3_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |