Gene name: SWP1
Reference locus (S288C): YMR149W
Gene biotype: protein_coding
Description: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit SWP1; Delta subunit of the oligosaccharyl transferase glycoprotein complex; complex is required for N-linked glycosylation of proteins in the endoplasmic reticulum
Top 10 interactors (score): OST6 (0.999); STT3 (0.999); OST4 (0.999); OST2 (0.999); OST5 (0.999); OST3 (0.999); OST1 (0.999); WBP1 (0.999); SEC61 (0.992); DIE2 (0.986); CWH41 (0.928); RPN3 (0.916); CAX4 (0.9); CNE1 (0.892); ALG5 (0.872); ALG8 (0.86); ALG3 (0.846); RPN10 (0.837); SPC3 (0.835); PRE9 (0.8)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:600489-601349:+ | gene-YMR149W_AKU4011 | rna-NM_001182651.1_AKU4011 | cds-NP_013869.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:71183-72043:- | gene-YMR149W_BG1 | rna-NM_001182651.1_BG1 | cds-NP_013869.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:543672-544532:+ | gene-YMR149W_Bruggeman | rna-NM_001182651.1_Bruggeman | cds-NP_013869.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:545887-546747:+ | gene-YMR149W_CAT1 | rna-NM_001182651.1_CAT1 | cds-NP_013869.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:533412-534272:+ | gene-YMR149W_CBS1585 | rna-NM_001182651.1_CBS1585 | cds-NP_013869.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:537301-538161:+ | gene-YMR149W_CBS436 | rna-NM_001182651.1_CBS436 | cds-NP_013869.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:646406-647266:+ | gene-YMR149W_CBS6412 | rna-NM_001182651.1_CBS6412 | cds-NP_013869.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:531973-532833:+ | gene-YMR149W_CBS6413 | rna-NM_001182651.1_CBS6413 | cds-NP_013869.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:555512-556372:+ | gene-YMR149W_CENPK1137D | rna-NM_001182651.1_CENPK1137D | cds-NP_013869.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:531606-532466:+ | gene-YMR149W_EthanolRed | rna-NM_001182651.1_EthanolRed | cds-NP_013869.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:538605-539465:+ | gene-YMR149W_FaliES1 | rna-NM_001182651.1_FaliES1 | cds-NP_013869.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000115.1:10435-11295:+ | gene-YMR149W_JAY291 | rna-NM_001182651.1_JAY291 | cds-NP_013869.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:538397-539257:+ | gene-YMR149W_MUCL30387 | rna-NM_001182651.1_MUCL30387 | cds-NP_013869.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:543929-544789:+ | gene-YMR149W_MUCL30388 | rna-NM_001182651.1_MUCL30388 | cds-NP_013869.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:534113-534973:+ | gene-YMR149W_MUCL39482 | rna-NM_001182651.1_MUCL39482 | cds-NP_013869.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:540408-541268:+ | gene-YMR149W_MUCL42920 | rna-NM_001182651.1_MUCL42920 | cds-NP_013869.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:560950-561810:+ | gene-YMR149W_NCIM3186 | rna-NM_001182651.1_NCIM3186 | cds-NP_013869.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:533752-534612:+ | gene-YMR149W_NCYC1407 | rna-NM_001182651.1_NCYC1407 | cds-NP_013869.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:544189-545049:+ | gene-YMR149W_PE2H3 | rna-NM_001182651.1_PE2H3 | cds-NP_013869.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:544647-545507:+ | gene-YMR149W_PE2H4 | rna-NM_001182651.1_PE2H4 | cds-NP_013869.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:560996-561856:+ | gene-YMR149W_S288C | rna-NM_001182651.1_S288C | cds-NP_013869.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000048.1:9420-10280:- | gene-YMR149W_SA1 | rna-NM_001182651.1_SA1 | cds-NP_013869.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:534253-535113:+ | gene-YMR149W_ThermosaccDry | rna-NM_001182651.1_ThermosaccDry | cds-NP_013869.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:546702-547562:+ | gene-YMR149W_VR1 | rna-NM_001182651.1_VR1 | cds-NP_013869.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:509145-510005:+ | gene-YMR149W_ZTW1 | rna-NM_001182651.1_ZTW1 | cds-NP_013869.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:545567-546427:+ | gene-YMR149W_Sparadoxus | rna-NM_001182651.1_Sparadoxus | cds-NP_013869.1_Sparadoxus | 89.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |