Gene name: SWM1
Reference locus (S288C): YDR260C
Gene biotype: protein_coding
Description: Subunit of the anaphase-promoting complex (APC); APC is an E3 ubiquitin ligase that regulates the metaphase-anaphase transition and exit from mitosis; required for activation of the daughter-specific gene expression and spore wall maturation; Belongs to the APC13 family
Top 10 interactors (score): CDC23 (0.999); APC2 (0.999); CDC16 (0.999); CDC26 (0.999); DOC1 (0.999); APC5 (0.999); APC4 (0.999); APC1 (0.999); APC11 (0.999); CDC27 (0.999); APC9 (0.999); MND2 (0.999); CDH1 (0.928); CLB2 (0.923); SLX5 (0.901); ASI2 (0.9); MET30 (0.9); ASI1 (0.9); CDC4 (0.9); ASI3 (0.9)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:933080-933592:- | gene-YDR260C_AKU4011 | rna-NM_001180568.1_AKU4011 | cds-NP_010546.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:191680-192192:+ | gene-YDR260C_BG1 | rna-NM_001180568.1_BG1 | cds-NP_010546.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:965410-965922:- | gene-YDR260C_Bruggeman | rna-NM_001180568.1_Bruggeman | cds-NP_010546.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:952687-953199:- | gene-YDR260C_CAT1 | rna-NM_001180568.1_CAT1 | cds-NP_010546.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:923429-923941:- | gene-YDR260C_CBS1585 | rna-NM_001180568.1_CBS1585 | cds-NP_010546.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:952953-953465:- | gene-YDR260C_CBS436 | rna-NM_001180568.1_CBS436 | cds-NP_010546.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:920189-920701:- | gene-YDR260C_CBS6412 | rna-NM_001180568.1_CBS6412 | cds-NP_010546.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:951283-951795:- | gene-YDR260C_CBS6413 | rna-NM_001180568.1_CBS6413 | cds-NP_010546.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:975637-976149:- | gene-YDR260C_CENPK1137D | rna-NM_001180568.1_CENPK1137D | cds-NP_010546.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:933747-934259:- | gene-YDR260C_EthanolRed | rna-NM_001180568.1_EthanolRed | cds-NP_010546.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:941949-942461:- | gene-YDR260C_FaliES1 | rna-NM_001180568.1_FaliES1 | cds-NP_010546.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000261.1:30449-30961:- | gene-YDR260C_JAY291 | rna-NM_001180568.1_JAY291 | cds-NP_010546.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:951308-951820:- | gene-YDR260C_MUCL30387 | rna-NM_001180568.1_MUCL30387 | cds-NP_010546.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:939338-939850:- | gene-YDR260C_MUCL30388 | rna-NM_001180568.1_MUCL30388 | cds-NP_010546.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:924834-925346:- | gene-YDR260C_MUCL39482 | rna-NM_001180568.1_MUCL39482 | cds-NP_010546.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:864593-865105:- | gene-YDR260C_MUCL42920 | rna-NM_001180568.1_MUCL42920 | cds-NP_010546.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:976640-977152:- | gene-YDR260C_NCIM3186 | rna-NM_001180568.1_NCIM3186 | cds-NP_010546.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:928503-929015:- | gene-YDR260C_NCYC1407 | rna-NM_001180568.1_NCYC1407 | cds-NP_010546.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:944726-945238:- | gene-YDR260C_PE2H3 | rna-NM_001180568.1_PE2H3 | cds-NP_010546.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:950003-950515:- | gene-YDR260C_PE2H4 | rna-NM_001180568.1_PE2H4 | cds-NP_010546.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:976717-977229:- | gene-YDR260C_S288C | rna-NM_001180568.1_S288C | cds-NP_010546.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:182563-183075:- | gene-YDR260C_SA1 | rna-NM_001180568.1_SA1 | cds-NP_010546.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:940103-940615:- | gene-YDR260C_ThermosaccDry | rna-NM_001180568.1_ThermosaccDry | cds-NP_010546.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:955327-955839:- | gene-YDR260C_VR1 | rna-NM_001180568.1_VR1 | cds-NP_010546.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:202849-203361:- | gene-YDR260C_ZTW1 | rna-NM_001180568.1_ZTW1 | cds-NP_010546.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:945504-946016:- | gene-YDR260C_Sparadoxus | rna-NM_001180568.1_Sparadoxus | cds-NP_010546.1_Sparadoxus | 91.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |