Gene name: SWI6
Reference locus (S288C): YLR182W
Gene biotype: protein_coding
Description: Regulatory protein SWI6; Transcription cofactor; forms complexes with Swi4p and Mbp1p to regulate transcription at the G1/S transition; involved in meiotic gene expression; also binds Stb1p to regulate transcription at START; cell wall stress induces phosphorylation by Mpk1p, which regulates Swi6p localization; required for the unfolded protein response, independently of its known transcriptional coactivators
Top 10 interactors (score): WHI5 (0.999); MBP1 (0.999); STB1 (0.998); CDC28 (0.997); SWI4 (0.995); NRM1 (0.994); CLN3 (0.993); SLT2 (0.986); CLN2 (0.985); MCM1 (0.963); CLN1 (0.96); SNF1 (0.94); CDC14 (0.938); FKH2 (0.931); RLM1 (0.931); SWI5 (0.929); CLB5 (0.923); FKH1 (0.92); KDX1 (0.904); ACE2 (0.904)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:472064-474475:+ | gene-YLR182W_AKU4011 | rna-NM_001182069.1_AKU4011 | cds-NP_013283.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000177.1:29262-31673:+ | gene-YLR182W_BG1 | rna-NM_001182069.1_BG1 | cds-NP_013283.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:512313-514724:+ | gene-YLR182W_Bruggeman | rna-NM_001182069.1_Bruggeman | cds-NP_013283.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:511908-514319:+ | gene-YLR182W_CAT1 | rna-NM_001182069.1_CAT1 | cds-NP_013283.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:507559-509970:+ | gene-YLR182W_CBS1585 | rna-NM_001182069.1_CBS1585 | cds-NP_013283.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:497698-500109:+ | gene-YLR182W_CBS436 | rna-NM_001182069.1_CBS436 | cds-NP_013283.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:476116-478527:+ | gene-YLR182W_CBS6412 | rna-NM_001182069.1_CBS6412 | cds-NP_013283.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:507851-510262:+ | gene-YLR182W_CBS6413 | rna-NM_001182069.1_CBS6413 | cds-NP_013283.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:502592-505003:+ | gene-YLR182W_CENPK1137D | rna-NM_001182069.1_CENPK1137D | cds-NP_013283.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:471588-473999:+ | gene-YLR182W_EthanolRed | rna-NM_001182069.1_EthanolRed | cds-NP_013283.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:500515-502926:+ | gene-YLR182W_FaliES1 | rna-NM_001182069.1_FaliES1 | cds-NP_013283.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:27418-29829:+ | gene-YLR182W_JAY291 | rna-NM_001182069.1_JAY291 | cds-NP_013283.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:512334-514745:+ | gene-YLR182W_MUCL30387 | rna-NM_001182069.1_MUCL30387 | cds-NP_013283.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:517266-519677:+ | gene-YLR182W_MUCL30388 | rna-NM_001182069.1_MUCL30388 | cds-NP_013283.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:508540-510951:+ | gene-YLR182W_MUCL39482 | rna-NM_001182069.1_MUCL39482 | cds-NP_013283.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:509038-511449:+ | gene-YLR182W_MUCL42920 | rna-NM_001182069.1_MUCL42920 | cds-NP_013283.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:517914-520325:+ | gene-YLR182W_NCIM3186 | rna-NM_001182069.1_NCIM3186 | cds-NP_013283.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:500967-503378:+ | gene-YLR182W_NCYC1407 | rna-NM_001182069.1_NCYC1407 | cds-NP_013283.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:505206-507617:+ | gene-YLR182W_PE2H3 | rna-NM_001182069.1_PE2H3 | cds-NP_013283.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:504950-507361:+ | gene-YLR182W_PE2H4 | rna-NM_001182069.1_PE2H4 | cds-NP_013283.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:517940-520351:+ | gene-YLR182W_S288C | rna-NM_001182069.1_S288C | cds-NP_013283.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000042.1:27475-29886:+ | gene-YLR182W_SA1 | rna-NM_001182069.1_SA1 | cds-NP_013283.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:503018-505429:+ | gene-YLR182W_ThermosaccDry | rna-NM_001182069.1_ThermosaccDry | cds-NP_013283.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:514319-516730:+ | gene-YLR182W_VR1 | rna-NM_001182069.1_VR1 | cds-NP_013283.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:27311-29722:+ | gene-YLR182W_ZTW1 | rna-NM_001182069.1_ZTW1 | cds-NP_013283.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:489129-491543:+ | gene-YLR182W_Sparadoxus | rna-NM_001182069.1_Sparadoxus | cds-NP_013283.1_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |