Gene name: SWF1
Reference locus (S288C): YDR126W
Gene biotype: protein_coding
Description: Palmitoyltransferase that acts on transmembrane proteins; including the SNAREs Snc1p, Syn8p, Tlg1p and likely all SNAREs; contains an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; may have a role in vacuole fusion
Top 10 interactors (score): AKR1 (0.974); AKR2 (0.973); PFA5 (0.923); SHR5 (0.918); VAC8 (0.908); NCP1 (0.901); TLG1 (0.813); YPK9 (0.757); RAS2 (0.728); YPL199C (0.701); FBP26 (0.695); SNA4 (0.674); TUL1 (0.663); LAS21 (0.652); SYN8 (0.65); LEA1 (0.631); YCK2 (0.622); TPI1 (0.622); ANR2 (0.613); CDC42 (0.598)
Homologues (species, bitscore): ZDHHC5 (Homo sapiens, 94.7); Zdhhc5 (Mus musculus, 94.7); zdhhc5a (Danio rerio, 94.4); zdhhc5 (Xenopus tropicalis, 94.0); CG34449 (Drosophila melanogaster, 90.9); dhhc-8 (Caenorhabditis elegans, 89.7); AT3G04970 (Arabidopsis thaliana, 88.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:674169-675179:+ | gene-YDR126W_AKU4011 | rna-NM_001180434.1_AKU4011 | cds-NP_010411.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:449688-450698:- | gene-YDR126W_BG1 | rna-NM_001180434.1_BG1 | cds-NP_010411.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:706229-707239:+ | gene-YDR126W_Bruggeman | rna-NM_001180434.1_Bruggeman | cds-NP_010411.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:692981-693991:+ | gene-YDR126W_CAT1 | rna-NM_001180434.1_CAT1 | cds-NP_010411.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:665207-666217:+ | gene-YDR126W_CBS1585 | rna-NM_001180434.1_CBS1585 | cds-NP_010411.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:691097-692107:+ | gene-YDR126W_CBS436 | rna-NM_001180434.1_CBS436 | cds-NP_010411.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:661559-662569:+ | gene-YDR126W_CBS6412 | rna-NM_001180434.1_CBS6412 | cds-NP_010411.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:690535-691545:+ | gene-YDR126W_CBS6413 | rna-NM_001180434.1_CBS6413 | cds-NP_010411.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:695674-696684:+ | gene-YDR126W_CENPK1137D | rna-NM_001180434.1_CENPK1137D | cds-NP_010411.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:675932-676942:+ | gene-YDR126W_EthanolRed | rna-NM_001180434.1_EthanolRed | cds-NP_010411.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:682726-683736:+ | gene-YDR126W_FaliES1 | rna-NM_001180434.1_FaliES1 | cds-NP_010411.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000002.1:34857-35867:+ | gene-YDR126W_JAY291 | rna-NM_001180434.1_JAY291 | cds-NP_010411.1_JAY291 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:692153-693163:+ | gene-YDR126W_MUCL30387 | rna-NM_001180434.1_MUCL30387 | cds-NP_010411.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:681172-682182:+ | gene-YDR126W_MUCL30388 | rna-NM_001180434.1_MUCL30388 | cds-NP_010411.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:666550-667560:+ | gene-YDR126W_MUCL39482 | rna-NM_001180434.1_MUCL39482 | cds-NP_010411.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:604499-605509:+ | gene-YDR126W_MUCL42920 | rna-NM_001180434.1_MUCL42920 | cds-NP_010411.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:703157-704167:+ | gene-YDR126W_NCIM3186 | rna-NM_001180434.1_NCIM3186 | cds-NP_010411.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:665953-666963:+ | gene-YDR126W_NCYC1407 | rna-NM_001180434.1_NCYC1407 | cds-NP_010411.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:685285-686295:+ | gene-YDR126W_PE2H3 | rna-NM_001180434.1_PE2H3 | cds-NP_010411.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:684590-685600:+ | gene-YDR126W_PE2H4 | rna-NM_001180434.1_PE2H4 | cds-NP_010411.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:703234-704244:+ | gene-YDR126W_S288C | rna-NM_001180434.1_S288C | cds-NP_010411.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:51901-52911:+ | gene-YDR126W_SA1 | rna-NM_001180434.1_SA1 | cds-NP_010411.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:682248-683258:+ | gene-YDR126W_ThermosaccDry | rna-NM_001180434.1_ThermosaccDry | cds-NP_010411.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:695599-696609:+ | gene-YDR126W_VR1 | rna-NM_001180434.1_VR1 | cds-NP_010411.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:679834-680844:+ | gene-YDR126W_ZTW1 | rna-NM_001180434.1_ZTW1 | cds-NP_010411.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:684325-685335:+ | gene-YDR126W_Sparadoxus | rna-NM_001180434.1_Sparadoxus | cds-NP_010411.1_Sparadoxus | 88.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |