Gene name: SWC7
Reference locus (S288C): YLR385C
Gene biotype: protein_coding
Description: SWR1-complex protein 7; Protein of unknown function; component of the Swr1p complex that incorporates Htz1p into chromatin; Belongs to the SWC7 family
Top 10 interactors (score): SWC4 (0.997); VPS71 (0.996); VPS72 (0.995); SWR1 (0.995); SWC5 (0.995); RVB2 (0.995); YAF9 (0.994); BDF1 (0.994); RVB1 (0.992); SWC3 (0.979); ACT1 (0.976); IES3 (0.96); ARP6 (0.96); IES1 (0.942); IES4 (0.942); ARP4 (0.937); NHP10 (0.935); INO80 (0.909); TAF14 (0.906); ARP5 (0.9)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:842529-842927:- | gene-YLR385C_AKU4011 | rna-NM_001182274.1_AKU4011 | cds-NP_013489.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:74708-75106:- | gene-YLR385C_BG1 | rna-NM_001182274.1_BG1 | cds-NP_013489.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:880835-881233:- | gene-YLR385C_Bruggeman | rna-NM_001182274.1_Bruggeman | cds-NP_013489.1_Bruggeman | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:876361-876759:- | gene-YLR385C_CAT1 | rna-NM_001182274.1_CAT1 | cds-NP_013489.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:878125-878523:- | gene-YLR385C_CBS1585 | rna-NM_001182274.1_CBS1585 | cds-NP_013489.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:861766-862164:- | gene-YLR385C_CBS436 | rna-NM_001182274.1_CBS436 | cds-NP_013489.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:914166-914564:- | gene-YLR385C_CBS6412 | rna-NM_001182274.1_CBS6412 | cds-NP_013489.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:878416-878814:- | gene-YLR385C_CBS6413 | rna-NM_001182274.1_CBS6413 | cds-NP_013489.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:877806-878204:- | gene-YLR385C_CENPK1137D | rna-NM_001182274.1_CENPK1137D | cds-NP_013489.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:835072-835470:- | gene-YLR385C_EthanolRed | rna-NM_001182274.1_EthanolRed | cds-NP_013489.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:864382-864780:- | gene-YLR385C_FaliES1 | rna-NM_001182274.1_FaliES1 | cds-NP_013489.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000434.1:17540-17938:- | gene-YLR385C_JAY291 | rna-NM_001182274.1_JAY291 | cds-NP_013489.1_JAY291 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:879346-879744:- | gene-YLR385C_MUCL30387 | rna-NM_001182274.1_MUCL30387 | cds-NP_013489.1_MUCL30387 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:885786-886184:- | gene-YLR385C_MUCL30388 | rna-NM_001182274.1_MUCL30388 | cds-NP_013489.1_MUCL30388 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:879345-879743:- | gene-YLR385C_MUCL39482 | rna-NM_001182274.1_MUCL39482 | cds-NP_013489.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:874002-874400:- | gene-YLR385C_MUCL42920 | rna-NM_001182274.1_MUCL42920 | cds-NP_013489.1_MUCL42920 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:892966-893364:- | gene-YLR385C_NCIM3186 | rna-NM_001182274.1_NCIM3186 | cds-NP_013489.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:888525-888923:- | gene-YLR385C_NCYC1407 | rna-NM_001182274.1_NCYC1407 | cds-NP_013489.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:874919-875317:- | gene-YLR385C_PE2H3 | rna-NM_001182274.1_PE2H3 | cds-NP_013489.1_PE2H3 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:874663-875061:- | gene-YLR385C_PE2H4 | rna-NM_001182274.1_PE2H4 | cds-NP_013489.1_PE2H4 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:892992-893390:- | gene-YLR385C_S288C | rna-NM_001182274.1_S288C | cds-NP_013489.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:155297-155695:+ | gene-YLR385C_SA1 | rna-NM_001182274.1_SA1 | cds-NP_013489.1_SA1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:867461-867859:- | gene-YLR385C_ThermosaccDry | rna-NM_001182274.1_ThermosaccDry | cds-NP_013489.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:880009-880407:- | gene-YLR385C_VR1 | rna-NM_001182274.1_VR1 | cds-NP_013489.1_VR1 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:204177-204575:- | gene-YLR385C_ZTW1 | rna-NM_001182274.1_ZTW1 | cds-NP_013489.1_ZTW1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |