Gene name: SWA2
Reference locus (S288C): YDR320C
Gene biotype: protein_coding
Description: Auxilin-like clathrin uncoating factor SWA2; Auxilin-like protein involved in vesicular transport; clathrin-binding protein required for uncoating of clathrin-coated vesicles
Top 10 interactors (score): CHC1 (0.999); CLC1 (0.957); SSA1 (0.942); SIS1 (0.926); PRK1 (0.924); SSA3 (0.918); SLA2 (0.917); SWD1 (0.913); SSE1 (0.912); SSA2 (0.906); SSA4 (0.903); ARF1 (0.893); YDJ1 (0.887); KAR2 (0.887); VPS1 (0.885); MGM1 (0.885); DNM1 (0.885); EDE1 (0.884); JJJ3 (0.881); YAP1802 (0.881)
Homologues (species, bitscore): DNAJC6 (Homo sapiens, 65.1); Dnajc6 (Mus musculus, 64.3); dnajc6 (Danio rerio, 65.1); dnajc6 (Xenopus tropicalis, 65.9); aux (Drosophila melanogaster, 60.8); dnj-25 (Caenorhabditis elegans, 55.5); AT4G12780 (Arabidopsis thaliana, 75.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1052137-1054143:- | gene-YDR320C_AKU4011 | rna-NM_001180628.1_AKU4011 | cds-NP_010606.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:77401-79407:+ | gene-YDR320C_BG1 | rna-NM_001180628.1_BG1 | cds-NP_010606.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1079666-1081672:- | gene-YDR320C_Bruggeman | rna-NM_001180628.1_Bruggeman | cds-NP_010606.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1066424-1068430:- | gene-YDR320C_CAT1 | rna-NM_001180628.1_CAT1 | cds-NP_010606.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1046581-1048587:- | gene-YDR320C_CBS1585 | rna-NM_001180628.1_CBS1585 | cds-NP_010606.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1064965-1066971:- | gene-YDR320C_CBS436 | rna-NM_001180628.1_CBS436 | cds-NP_010606.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1043269-1045275:- | gene-YDR320C_CBS6412 | rna-NM_001180628.1_CBS6412 | cds-NP_010606.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1064500-1066506:- | gene-YDR320C_CBS6413 | rna-NM_001180628.1_CBS6413 | cds-NP_010606.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1104736-1106742:- | gene-YDR320C_CENPK1137D | rna-NM_001180628.1_CENPK1137D | cds-NP_010606.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:227678-229684:- | gene-YDR320C_EthanolRed | rna-NM_001180628.1_EthanolRed | cds-NP_010606.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1058893-1060899:- | gene-YDR320C_FaliES1 | rna-NM_001180628.1_FaliES1 | cds-NP_010606.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000386.1:11406-13412:- | gene-YDR320C_JAY291 | rna-NM_001180628.1_JAY291 | cds-NP_010606.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1064928-1066934:- | gene-YDR320C_MUCL30387 | rna-NM_001180628.1_MUCL30387 | cds-NP_010606.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1053862-1055868:- | gene-YDR320C_MUCL30388 | rna-NM_001180628.1_MUCL30388 | cds-NP_010606.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1038388-1040394:- | gene-YDR320C_MUCL39482 | rna-NM_001180628.1_MUCL39482 | cds-NP_010606.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:985477-987483:- | gene-YDR320C_MUCL42920 | rna-NM_001180628.1_MUCL42920 | cds-NP_010606.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1106018-1108024:- | gene-YDR320C_NCIM3186 | rna-NM_001180628.1_NCIM3186 | cds-NP_010606.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1051679-1053685:- | gene-YDR320C_NCYC1407 | rna-NM_001180628.1_NCYC1407 | cds-NP_010606.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1062682-1064688:- | gene-YDR320C_PE2H3 | rna-NM_001180628.1_PE2H3 | cds-NP_010606.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1068267-1070273:- | gene-YDR320C_PE2H4 | rna-NM_001180628.1_PE2H4 | cds-NP_010606.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1106095-1108101:- | gene-YDR320C_S288C | rna-NM_001180628.1_S288C | cds-NP_010606.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:76913-78919:- | gene-YDR320C_SA1 | rna-NM_001180628.1_SA1 | cds-NP_010606.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1063166-1065172:- | gene-YDR320C_ThermosaccDry | rna-NM_001180628.1_ThermosaccDry | cds-NP_010606.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1079097-1081103:- | gene-YDR320C_VR1 | rna-NM_001180628.1_VR1 | cds-NP_010606.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:107277-109283:- | gene-YDR320C_ZTW1 | rna-NM_001180628.1_ZTW1 | cds-NP_010606.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1058644-1060647:- | gene-YDR320C_Sparadoxus | rna-NM_001180628.1_Sparadoxus | cds-NP_010606.1_Sparadoxus | 84.3 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |