Gene name: SVS1
Reference locus (S288C): YPL163C
Gene biotype: protein_coding
Description: Protein SVS1; Cell wall and vacuolar protein; required for wild-type resistance to vanadate; SVS1 has a paralog, SRL1, that arose from the whole genome duplication
Top 10 interactors (score): TOS6 (0.891); PRY2 (0.89); PGU1 (0.714); ALR2 (0.65); CSI2 (0.647); AXL2 (0.57); VRG4 (0.565); CLN2 (0.561); SNG1 (0.55); YHK8 (0.529); TOS4 (0.529); NRM1 (0.528); YLR042C (0.504); TPO2 (0.497); TOH1 (0.454); PNT1 (0.451); ERP2 (0.45); PDR8 (0.45); PAI3 (0.45); MSB2 (0.401)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:219586-220368:- | gene-YPL163C_AKU4011 | rna-NM_001183977.1_AKU4011 | cds-NP_015162.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:425254-426036:- | gene-YPL163C_BG1 | rna-NM_001183977.1_BG1 | cds-NP_015162.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:245576-246358:- | gene-YPL163C_Bruggeman | rna-NM_001183977.1_Bruggeman | cds-NP_015162.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:242243-243025:- | gene-YPL163C_CAT1 | rna-NM_001183977.1_CAT1 | cds-NP_015162.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:223652-224431:- | gene-YPL163C_CBS1585 | rna-NM_001183977.1_CBS1585 | cds-NP_015162.1_CBS1585 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:238306-239088:- | gene-YPL163C_CBS436 | rna-NM_001183977.1_CBS436 | cds-NP_015162.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:228327-229109:- | gene-YPL163C_CBS6412 | rna-NM_001183977.1_CBS6412 | cds-NP_015162.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:220287-221069:- | gene-YPL163C_CBS6413 | rna-NM_001183977.1_CBS6413 | cds-NP_015162.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:241802-242584:- | gene-YPL163C_CENPK1137D | rna-NM_001183977.1_CENPK1137D | cds-NP_015162.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:218330-219097:- | gene-YPL163C_EthanolRed | rna-NM_001183977.1_EthanolRed | cds-NP_015162.1_EthanolRed | 97.8 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:225922-226689:- | gene-YPL163C_FaliES1 | rna-NM_001183977.1_FaliES1 | cds-NP_015162.1_FaliES1 | 97.8 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000007.1:139207-139989:+ | gene-YPL163C_JAY291 | rna-NM_001183977.1_JAY291 | cds-NP_015162.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:236819-237601:- | gene-YPL163C_MUCL30387 | rna-NM_001183977.1_MUCL30387 | cds-NP_015162.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:234833-235615:- | gene-YPL163C_MUCL30388 | rna-NM_001183977.1_MUCL30388 | cds-NP_015162.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:216981-217760:- | gene-YPL163C_MUCL39482 | rna-NM_001183977.1_MUCL39482 | cds-NP_015162.1_MUCL39482 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:273707-274489:- | gene-YPL163C_MUCL42920 | rna-NM_001183977.1_MUCL42920 | cds-NP_015162.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:241901-242683:- | gene-YPL163C_NCIM3186 | rna-NM_001183977.1_NCIM3186 | cds-NP_015162.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:223435-224217:- | gene-YPL163C_NCYC1407 | rna-NM_001183977.1_NCYC1407 | cds-NP_015162.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:230868-231650:- | gene-YPL163C_PE2H3 | rna-NM_001183977.1_PE2H3 | cds-NP_015162.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:230511-231293:- | gene-YPL163C_PE2H4 | rna-NM_001183977.1_PE2H4 | cds-NP_015162.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:241918-242700:- | gene-YPL163C_S288C | rna-NM_001183977.1_S288C | cds-NP_015162.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000012.1:130982-131764:+ | gene-YPL163C_SA1 | rna-NM_001183977.1_SA1 | cds-NP_015162.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:225720-226487:- | gene-YPL163C_ThermosaccDry | rna-NM_001183977.1_ThermosaccDry | cds-NP_015162.1_ThermosaccDry | 97.8 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:240639-241421:- | gene-YPL163C_VR1 | rna-NM_001183977.1_VR1 | cds-NP_015162.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:225048-225815:- | gene-YPL163C_ZTW1 | rna-NM_001183977.1_ZTW1 | cds-NP_015162.1_ZTW1 | 97.8 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:226589-227356:- | gene-YPL163C_Sparadoxus | rna-NM_001183977.1_Sparadoxus | cds-NP_015162.1_Sparadoxus | 86.3 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |