Gene name: SVP26
Reference locus (S288C): YHR181W
Gene biotype: protein_coding
Description: Integral membrane protein of the early Golgi apparatus and ER; involved in COP II vesicle transport; may also function to promote retention of proteins in the early Golgi compartment
Top 10 interactors (score): KTR3 (0.937); TMA19 (0.907); ERV41 (0.832); ERV14 (0.818); TVP23 (0.813); ERV29 (0.784); TVP18 (0.748); ERV46 (0.745); MNN2 (0.735); SEC23 (0.731); SAR1 (0.729); TVP15 (0.729); MNN5 (0.727); EMP46 (0.713); KTR6 (0.713); SEC24 (0.697); YJL118W (0.694); ERV25 (0.693); EMP47 (0.652); KTR7 (0.641)
Homologues (species, bitscore): TEX261 (Homo sapiens, 124.8); Tex261 (Mus musculus, 125.2); tex261 (Danio rerio, 136.3); tex261 (Xenopus tropicalis, 131.3); CG3500 (Drosophila melanogaster, 110.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:454316-455002:+ | gene-YHR181W_AKU4011 | rna-NM_001179312.3_AKU4011 | cds-NP_012051.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:62748-63434:- | gene-YHR181W_BG1 | rna-NM_001179312.3_BG1 | cds-NP_012051.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:461565-462251:+ | gene-YHR181W_Bruggeman | rna-NM_001179312.3_Bruggeman | cds-NP_012051.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:457829-458515:+ | gene-YHR181W_CAT1 | rna-NM_001179312.3_CAT1 | cds-NP_012051.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:453768-454454:+ | gene-YHR181W_CBS1585 | rna-NM_001179312.3_CBS1585 | cds-NP_012051.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:451217-451903:+ | gene-YHR181W_CBS436 | rna-NM_001179312.3_CBS436 | cds-NP_012051.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:453867-454553:+ | gene-YHR181W_CBS6412 | rna-NM_001179312.3_CBS6412 | cds-NP_012051.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:455158-455844:+ | gene-YHR181W_CBS6413 | rna-NM_001179312.3_CBS6413 | cds-NP_012051.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:460416-461102:+ | gene-YHR181W_CENPK1137D | rna-NM_001179312.3_CENPK1137D | cds-NP_012051.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:512861-513547:+ | gene-YHR181W_EthanolRed | rna-NM_001179312.3_EthanolRed | cds-NP_012051.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:455305-455991:+ | gene-YHR181W_FaliES1 | rna-NM_001179312.3_FaliES1 | cds-NP_012051.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:455-1141:+ | gene-YHR181W_JAY291 | rna-NM_001179312.3_JAY291 | cds-NP_012051.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:462891-463577:+ | gene-YHR181W_MUCL30387 | rna-NM_001179312.3_MUCL30387 | cds-NP_012051.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:462314-463000:+ | gene-YHR181W_MUCL30388 | rna-NM_001179312.3_MUCL30388 | cds-NP_012051.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:453679-454365:+ | gene-YHR181W_MUCL39482 | rna-NM_001179312.3_MUCL39482 | cds-NP_012051.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:461621-462307:+ | gene-YHR181W_MUCL42920 | rna-NM_001179312.3_MUCL42920 | cds-NP_012051.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:467110-467796:+ | gene-YHR181W_NCIM3186 | rna-NM_001179312.3_NCIM3186 | cds-NP_012051.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:456140-456826:+ | gene-YHR181W_NCYC1407 | rna-NM_001179312.3_NCYC1407 | cds-NP_012051.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:455294-455980:+ | gene-YHR181W_PE2H3 | rna-NM_001179312.3_PE2H3 | cds-NP_012051.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:462721-463407:+ | gene-YHR181W_PE2H4 | rna-NM_001179312.3_PE2H4 | cds-NP_012051.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:467228-467914:+ | gene-YHR181W_S288C | rna-NM_001179312.3_S288C | cds-NP_012051.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:15384-16070:+ | gene-YHR181W_SA1 | rna-NM_001179312.3_SA1 | cds-NP_012051.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:456388-457074:+ | gene-YHR181W_ThermosaccDry | rna-NM_001179312.3_ThermosaccDry | cds-NP_012051.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:465594-466280:+ | gene-YHR181W_VR1 | rna-NM_001179312.3_VR1 | cds-NP_012051.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:446626-447312:+ | gene-YHR181W_ZTW1 | rna-NM_001179312.3_ZTW1 | cds-NP_012051.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:453307-453993:+ | gene-YHR181W_Sparadoxus | rna-NM_001179312.3_Sparadoxus | cds-NP_012051.3_Sparadoxus | 98.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |