Gene name: SVL3
Reference locus (S288C): YPL032C
Gene biotype: protein_coding
Description: Styryl dye vacuolar localization protein 3; Protein of unknown function; mutant phenotype suggests a potential role in vacuolar function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; relocalizes from bud neck to cytoplasm upon DNA replication stress; SVL3 has a paralog, PAM1, that arose from the whole genome duplication
Top 10 interactors (score): PAN5 (0.879); SDS24 (0.696); YPT35 (0.691); YKE2 (0.642); CRN1 (0.625); COS10 (0.572); GIM4 (0.553); PAC10 (0.551); NIP100 (0.547); MON2 (0.525); ROG3 (0.499); PFD1 (0.499); SNX41 (0.499); PAM1 (0.495); INP52 (0.489); CSR2 (0.485); JJJ1 (0.481); MSB2 (0.472); NPP1 (0.47); NPP2 (0.47)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:460379-462856:- | gene-YPL032C_AKU4011 | rna-NM_001183846.1_AKU4011 | cds-NP_015293.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:434525-437014:+ | gene-YPL032C_BG1 | rna-NM_001183846.1_BG1 | cds-NP_015293.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:537340-539817:- | gene-YPL032C_Bruggeman | rna-NM_001183846.1_Bruggeman | cds-NP_015293.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:577018-579495:- | gene-YPL032C_CAT1 | rna-NM_001183846.1_CAT1 | cds-NP_015293.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:464449-466926:- | gene-YPL032C_CBS1585 | rna-NM_001183846.1_CBS1585 | cds-NP_015293.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:478573-481062:- | gene-YPL032C_CBS436 | rna-NM_001183846.1_CBS436 | cds-NP_015293.1_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:468641-471118:- | gene-YPL032C_CBS6412 | rna-NM_001183846.1_CBS6412 | cds-NP_015293.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:461001-463478:- | gene-YPL032C_CBS6413 | rna-NM_001183846.1_CBS6413 | cds-NP_015293.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:488857-491333:- | gene-YPL032C_CENPK1137D | rna-NM_001183846.1_CENPK1137D | cds-NP_015293.1_CENPK1137D | 99.9 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:458737-461214:- | gene-YPL032C_EthanolRed | rna-NM_001183846.1_EthanolRed | cds-NP_015293.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:466567-469044:- | gene-YPL032C_FaliES1 | rna-NM_001183846.1_FaliES1 | cds-NP_015293.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:75165-77654:- | gene-YPL032C_JAY291 | rna-NM_001183846.1_JAY291 | cds-NP_015293.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:478276-480765:- | gene-YPL032C_MUCL30387 | rna-NM_001183846.1_MUCL30387 | cds-NP_015293.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:477397-479874:- | gene-YPL032C_MUCL30388 | rna-NM_001183846.1_MUCL30388 | cds-NP_015293.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:457765-460242:- | gene-YPL032C_MUCL39482 | rna-NM_001183846.1_MUCL39482 | cds-NP_015293.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:516379-518868:- | gene-YPL032C_MUCL42920 | rna-NM_001183846.1_MUCL42920 | cds-NP_015293.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:488870-491347:- | gene-YPL032C_NCIM3186 | rna-NM_001183846.1_NCIM3186 | cds-NP_015293.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:465043-467520:- | gene-YPL032C_NCYC1407 | rna-NM_001183846.1_NCYC1407 | cds-NP_015293.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:471687-474164:- | gene-YPL032C_PE2H3 | rna-NM_001183846.1_PE2H3 | cds-NP_015293.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:471302-473779:- | gene-YPL032C_PE2H4 | rna-NM_001183846.1_PE2H4 | cds-NP_015293.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:488887-491364:- | gene-YPL032C_S288C | rna-NM_001183846.1_S288C | cds-NP_015293.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:31731-34220:- | gene-YPL032C_SA1 | rna-NM_001183846.1_SA1 | cds-NP_015293.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:466366-468843:- | gene-YPL032C_ThermosaccDry | rna-NM_001183846.1_ThermosaccDry | cds-NP_015293.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:481254-483743:- | gene-YPL032C_VR1 | rna-NM_001183846.1_VR1 | cds-NP_015293.1_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:465663-468139:- | gene-YPL032C_ZTW1 | rna-NM_001183846.1_ZTW1 | cds-NP_015293.1_ZTW1 | 99.8 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:465645-468113:- | gene-YPL032C_Sparadoxus | rna-NM_001183846.1_Sparadoxus | cds-NP_015293.1_Sparadoxus | 89.5 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |