Gene name: SVF1
Reference locus (S288C): YDR346C
Gene biotype: protein_coding
Description: Survival factor 1; Protein with a potential role in cell survival pathways; required for the diauxic growth shift; expression in mammalian cells increases survival under conditions inducing apoptosis; mutant has increased aneuploidy tolerance; Belongs to the SVF1 family
Top 10 interactors (score): OXR1 (0.877); RRD1 (0.861); ZPR1 (0.838); LCB3 (0.813); XDJ1 (0.793); ERD1 (0.792); NCE103 (0.772); CRN1 (0.762); YTA6 (0.759); LCB4 (0.753); CMR2 (0.716); LHS1 (0.696); TCM62 (0.695); SCJ1 (0.671); SEN2 (0.65); SUR2 (0.649); QCR9 (0.645); RRD2 (0.644); UBA4 (0.619); MET2 (0.606)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1113053-1114498:- | gene-YDR346C_AKU4011 | rna-NM_001180654.3_AKU4011 | cds-NP_010633.3_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000189.1:10567-12012:- | gene-YDR346C_BG1 | rna-NM_001180654.3_BG1 | cds-NP_010633.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1143328-1144773:- | gene-YDR346C_Bruggeman | rna-NM_001180654.3_Bruggeman | cds-NP_010633.3_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1122181-1123626:- | gene-YDR346C_CAT1 | rna-NM_001180654.3_CAT1 | cds-NP_010633.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1107769-1109214:- | gene-YDR346C_CBS1585 | rna-NM_001180654.3_CBS1585 | cds-NP_010633.3_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1126578-1128023:- | gene-YDR346C_CBS436 | rna-NM_001180654.3_CBS436 | cds-NP_010633.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1104183-1105628:- | gene-YDR346C_CBS6412 | rna-NM_001180654.3_CBS6412 | cds-NP_010633.3_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1125922-1127367:- | gene-YDR346C_CBS6413 | rna-NM_001180654.3_CBS6413 | cds-NP_010633.3_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1165862-1167307:- | gene-YDR346C_CENPK1137D | rna-NM_001180654.3_CENPK1137D | cds-NP_010633.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1117809-1119254:- | gene-YDR346C_EthanolRed | rna-NM_001180654.3_EthanolRed | cds-NP_010633.3_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1120745-1122190:- | gene-YDR346C_FaliES1 | rna-NM_001180654.3_FaliES1 | cds-NP_010633.3_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000423.1:2812-4257:- | gene-YDR346C_JAY291 | rna-NM_001180654.3_JAY291 | cds-NP_010633.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1127219-1128676:- | gene-YDR346C_MUCL30387 | rna-NM_001180654.3_MUCL30387 | cds-NP_010633.3_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1109611-1111056:- | gene-YDR346C_MUCL30388 | rna-NM_001180654.3_MUCL30388 | cds-NP_010633.3_MUCL30388 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1099303-1100748:- | gene-YDR346C_MUCL39482 | rna-NM_001180654.3_MUCL39482 | cds-NP_010633.3_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1041453-1042910:- | gene-YDR346C_MUCL42920 | rna-NM_001180654.3_MUCL42920 | cds-NP_010633.3_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1167137-1168582:- | gene-YDR346C_NCIM3186 | rna-NM_001180654.3_NCIM3186 | cds-NP_010633.3_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1112839-1114284:- | gene-YDR346C_NCYC1407 | rna-NM_001180654.3_NCYC1407 | cds-NP_010633.3_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1118439-1119884:- | gene-YDR346C_PE2H3 | rna-NM_001180654.3_PE2H3 | cds-NP_010633.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1124024-1125469:- | gene-YDR346C_PE2H4 | rna-NM_001180654.3_PE2H4 | cds-NP_010633.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1167214-1168659:- | gene-YDR346C_S288C | rna-NM_001180654.3_S288C | cds-NP_010633.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:132661-134106:- | gene-YDR346C_SA1 | rna-NM_001180654.3_SA1 | cds-NP_010633.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1125018-1126463:- | gene-YDR346C_ThermosaccDry | rna-NM_001180654.3_ThermosaccDry | cds-NP_010633.3_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1134834-1136279:- | gene-YDR346C_VR1 | rna-NM_001180654.3_VR1 | cds-NP_010633.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:168423-169868:- | gene-YDR346C_ZTW1 | rna-NM_001180654.3_ZTW1 | cds-NP_010633.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1119747-1121198:- | gene-YDR346C_Sparadoxus | rna-NM_001180654.3_Sparadoxus | cds-NP_010633.3_Sparadoxus | 90.7 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |