Gene name: SUR2
Reference locus (S288C): YDR297W
Gene biotype: protein_coding
Description: Sphingolipid C4-hydroxylase SUR2; Sphinganine C4-hydroxylase; catalyses the conversion of sphinganine to phytosphingosine in sphingolipid biosyntheis; Belongs to the sterol desaturase family
Top 10 interactors (score): LCB3 (0.997); LIP1 (0.991); LCB4 (0.989); LAC1 (0.988); TSC10 (0.986); LAG1 (0.983); YPC1 (0.973); YDC1 (0.969); SCS7 (0.966); LCB5 (0.949); YSR3 (0.948); LCB2 (0.875); SUR1 (0.867); LCB1 (0.846); IPT1 (0.826); CSG2 (0.772); ELO3 (0.761); ISC1 (0.725); ELO2 (0.71); AUR1 (0.71)
Homologues (species, bitscore): MSMO1 (Homo sapiens, 89.0); Msmo1 (Mus musculus, 88.6); msmo1 (Danio rerio, 80.5); msmo1 (Xenopus tropicalis, 77.4); CG11162 (Drosophila melanogaster, 69.3); F35C8.5 (Caenorhabditis elegans, 54.3); SBH1 (Arabidopsis thaliana, 209.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1008527-1009576:+ | gene-YDR297W_AKU4011 | rna-NM_001180605.1_AKU4011 | cds-NP_010583.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:121991-123040:- | gene-YDR297W_BG1 | rna-NM_001180605.1_BG1 | cds-NP_010583.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1035789-1036838:+ | gene-YDR297W_Bruggeman | rna-NM_001180605.1_Bruggeman | cds-NP_010583.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1022800-1023849:+ | gene-YDR297W_CAT1 | rna-NM_001180605.1_CAT1 | cds-NP_010583.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1002972-1004021:+ | gene-YDR297W_CBS1585 | rna-NM_001180605.1_CBS1585 | cds-NP_010583.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1021327-1022376:+ | gene-YDR297W_CBS436 | rna-NM_001180605.1_CBS436 | cds-NP_010583.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:999654-1000703:+ | gene-YDR297W_CBS6412 | rna-NM_001180605.1_CBS6412 | cds-NP_010583.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1020892-1021941:+ | gene-YDR297W_CBS6413 | rna-NM_001180605.1_CBS6413 | cds-NP_010583.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1055194-1056243:+ | gene-YDR297W_CENPK1137D | rna-NM_001180605.1_CENPK1137D | cds-NP_010583.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1007070-1008119:+ | gene-YDR297W_EthanolRed | rna-NM_001180605.1_EthanolRed | cds-NP_010583.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1015272-1016321:+ | gene-YDR297W_FaliES1 | rna-NM_001180605.1_FaliES1 | cds-NP_010583.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000130.1:33086-34135:+ | gene-YDR297W_JAY291 | rna-NM_001180605.1_JAY291 | cds-NP_010583.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1021304-1022353:+ | gene-YDR297W_MUCL30387 | rna-NM_001180605.1_MUCL30387 | cds-NP_010583.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1008371-1009420:+ | gene-YDR297W_MUCL30388 | rna-NM_001180605.1_MUCL30388 | cds-NP_010583.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:994778-995827:+ | gene-YDR297W_MUCL39482 | rna-NM_001180605.1_MUCL39482 | cds-NP_010583.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:934753-935802:+ | gene-YDR297W_MUCL42920 | rna-NM_001180605.1_MUCL42920 | cds-NP_010583.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1056474-1057523:+ | gene-YDR297W_NCIM3186 | rna-NM_001180605.1_NCIM3186 | cds-NP_010583.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1008071-1009120:+ | gene-YDR297W_NCYC1407 | rna-NM_001180605.1_NCYC1407 | cds-NP_010583.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1019058-1020107:+ | gene-YDR297W_PE2H3 | rna-NM_001180605.1_PE2H3 | cds-NP_010583.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1024643-1025692:+ | gene-YDR297W_PE2H4 | rna-NM_001180605.1_PE2H4 | cds-NP_010583.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1056551-1057600:+ | gene-YDR297W_S288C | rna-NM_001180605.1_S288C | cds-NP_010583.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:33257-34306:+ | gene-YDR297W_SA1 | rna-NM_001180605.1_SA1 | cds-NP_010583.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1019557-1020606:+ | gene-YDR297W_ThermosaccDry | rna-NM_001180605.1_ThermosaccDry | cds-NP_010583.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1035477-1036526:+ | gene-YDR297W_VR1 | rna-NM_001180605.1_VR1 | cds-NP_010583.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:63685-64734:+ | gene-YDR297W_ZTW1 | rna-NM_001180605.1_ZTW1 | cds-NP_010583.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1015159-1016208:+ | gene-YDR297W_Sparadoxus | rna-NM_001180605.1_Sparadoxus | cds-NP_010583.1_Sparadoxus | 91.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |