SUP6 (YNCF0012C)

Gene profile

Gene name: SUP6
Reference locus (S288C): YNCF0012C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005300.1:200768-200856:- gene-YNCF0012C_AKU4011 rna-YNCF0012C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000071.1:60180-60268:+ gene-YNCF0012C_BG1 rna-YNCF0012C_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005508.1:204423-204511:- gene-YNCF0012C_Bruggeman rna-YNCF0012C_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005524.1:206407-206495:- gene-YNCF0012C_CAT1 rna-YNCF0012C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005364.1:202258-202346:- gene-YNCF0012C_CBS1585 rna-YNCF0012C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005348.1:175229-175317:- gene-YNCF0012C_CBS436 rna-YNCF0012C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005332.1:201337-201425:- gene-YNCF0012C_CBS6412 rna-YNCF0012C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005316.1:203995-204083:- gene-YNCF0012C_CBS6413 rna-YNCF0012C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001527.1:206719-206807:- gene-YNCF0012C_CENPK1137D rna-YNCF0012C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005476.1:199874-199962:- gene-YNCF0012C_EthanolRed rna-YNCF0012C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005540.1:201525-201613:- gene-YNCF0012C_FaliES1 rna-YNCF0012C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000453.1:4665-4753:- gene-YNCF0012C_JAY291 rna-YNCF0012C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005412.1:204858-204946:- gene-YNCF0012C_MUCL30387 rna-YNCF0012C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005444.1:200350-200438:- gene-YNCF0012C_MUCL30388 rna-YNCF0012C_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005284.1:200178-200266:- gene-YNCF0012C_MUCL39482 rna-YNCF0012C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005428.1:199531-199619:- gene-YNCF0012C_MUCL42920 rna-YNCF0012C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011815.1:210618-210706:- gene-YNCF0012C_NCIM3186 rna-YNCF0012C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005268.1:201060-201148:- gene-YNCF0012C_NCYC1407 rna-YNCF0012C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994145.1:243073-243161:- gene-YNCF0012C_PE2H3 rna-YNCF0012C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999877.1:242621-242709:- gene-YNCF0012C_PE2H4 rna-YNCF0012C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001138.5:210619-210707:- gene-YNCF0012C_S288C rna-YNCF0012C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000011.1:113762-113850:+ gene-YNCF0012C_SA1 rna-YNCF0012C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005492.1:200682-200770:- gene-YNCF0012C_ThermosaccDry rna-YNCF0012C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:216445-216533:- gene-YNCF0012C_VR1 rna-YNCF0012C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000013.1:131154-131242:- gene-YNCF0012C_ZTW1 rna-YNCF0012C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047492.1:224317-224405:- gene-YNCF0012C_Sparadoxus rna-YNCF0012C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files