SUP53 (YNCC0002W)

Gene profile

Gene name: SUP53
Reference locus (S288C): YNCC0002W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:85568-85681:+ gene-YNCC0002W_AKU4011 rna-YNCC0002W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000178.1:60365-60478:- gene-YNCC0002W_BG1 rna-YNCC0002W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:80156-80269:+ gene-YNCC0002W_Bruggeman rna-YNCC0002W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000221.1:170-283:- gene-YNCC0002W_CAT1 rna-YNCC0002W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:86217-86330:+ gene-YNCC0002W_CBS1585 rna-YNCC0002W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005345.1:91135-91248:+ gene-YNCC0002W_CBS436 rna-YNCC0002W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:73745-73788:+ gene-YNCC0002W_CBS6412 rna-YNCC0002W_CBS6412 Unknown 53.6 53.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia MBVP01000016.1:756-869:+ gene-YNCC0002W_CBS6413 rna-YNCC0002W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:90324-90437:+ gene-YNCC0002W_CENPK1137D rna-YNCC0002W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:83586-83699:+ gene-YNCC0002W_EthanolRed rna-YNCC0002W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:85876-85989:+ gene-YNCC0002W_FaliES1 rna-YNCC0002W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000091.1:1474-1587:- gene-YNCC0002W_JAY291 rna-YNCC0002W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000064.1:426-539:- gene-YNCC0002W_MUCL30387 rna-YNCC0002W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:78144-78257:+ gene-YNCC0002W_MUCL30388 rna-YNCC0002W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:86633-86746:+ gene-YNCC0002W_MUCL39482 rna-YNCC0002W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000143.1:324-437:- gene-YNCC0002W_MUCL42920 rna-YNCC0002W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:90491-90604:+ gene-YNCC0002W_NCIM3186 rna-YNCC0002W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:87116-87229:+ gene-YNCC0002W_NCYC1407 rna-YNCC0002W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:91280-91393:+ gene-YNCC0002W_PE2H3 rna-YNCC0002W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:91237-91350:+ gene-YNCC0002W_PE2H4 rna-YNCC0002W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:90859-90972:+ gene-YNCC0002W_S288C rna-YNCC0002W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000130.1:182-295:+ gene-YNCC0002W_SA1 rna-YNCC0002W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:86450-86563:+ gene-YNCC0002W_ThermosaccDry rna-YNCC0002W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000285.1:399-512:+ gene-YNCC0002W_VR1 rna-YNCC0002W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:85380-85493:+ gene-YNCC0002W_ZTW1 rna-YNCC0002W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:115657-115771:+ gene-YNCC0002W_Sparadoxus rna-YNCC0002W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files