SUP5 (YNCM0006W)

Gene profile

Gene name: SUP5
Reference locus (S288C): YNCM0006W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:162174-162262:+ gene-YNCM0006W_AKU4011 rna-YNCM0006W_AKU4011 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:313553-313641:- gene-YNCM0006W_BG1 rna-YNCM0006W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:168297-168385:+ gene-YNCM0006W_Bruggeman rna-YNCM0006W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000045.1:773-861:- gene-YNCM0006W_CAT1 rna-YNCM0006W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:162956-163044:+ gene-YNCM0006W_CBS1585 rna-YNCM0006W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005355.1:168087-168175:+ gene-YNCM0006W_CBS436 rna-YNCM0006W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:276754-276842:+ gene-YNCM0006W_CBS6412 rna-YNCM0006W_CBS6412 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:162268-162356:+ gene-YNCM0006W_CBS6413 rna-YNCM0006W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:174998-175086:+ gene-YNCM0006W_CENPK1137D rna-YNCM0006W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:163058-163146:+ gene-YNCM0006W_EthanolRed rna-YNCM0006W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:163602-163690:+ gene-YNCM0006W_FaliES1 rna-YNCM0006W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000131.1:1-85:+ gene-YNCM0006W_JAY291 rna-YNCM0006W_JAY291 Unknown 94.6 94.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000182.1:205-293:- gene-YNCM0006W_MUCL30387 rna-YNCM0006W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:170288-170376:+ gene-YNCM0006W_MUCL30388 rna-YNCM0006W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:163282-163370:+ gene-YNCM0006W_MUCL39482 rna-YNCM0006W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:168013-168101:+ gene-YNCM0006W_MUCL42920 rna-YNCM0006W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:168749-168837:+ gene-YNCM0006W_NCIM3186 rna-YNCM0006W_NCIM3186 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:163014-163102:+ gene-YNCM0006W_NCYC1407 rna-YNCM0006W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:168753-168841:+ gene-YNCM0006W_PE2H3 rna-YNCM0006W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:168954-169042:+ gene-YNCM0006W_PE2H4 rna-YNCM0006W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:168795-168883:+ gene-YNCM0006W_S288C rna-YNCM0006W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000041.1:15239-15327:- gene-YNCM0006W_SA1 rna-YNCM0006W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:162856-162944:+ gene-YNCM0006W_ThermosaccDry rna-YNCM0006W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:166560-166648:+ gene-YNCM0006W_VR1 rna-YNCM0006W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:142134-142222:+ gene-YNCM0006W_ZTW1 rna-YNCM0006W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:173729-173817:+ gene-YNCM0006W_Sparadoxus rna-YNCM0006W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files