SUP2 (YNCD0018W)

Gene profile

Gene name: SUP2
Reference locus (S288C): YNCD0018W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:902642-902730:+ gene-YNCD0018W_AKU4011 rna-YNCD0018W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000080.1:222547-222635:- gene-YNCD0018W_BG1 rna-YNCD0018W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:934968-935056:+ gene-YNCD0018W_Bruggeman rna-YNCD0018W_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000122.1:646-734:+ gene-YNCD0018W_2_CAT1 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000343.1:349-437:+ gene-YNCD0018W_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:922256-922344:+ gene-YNCD0018W_CAT1 rna-YNCD0018W_CAT1 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:892991-893079:+ gene-YNCD0018W_CBS1585 rna-YNCD0018W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005346.1:922548-922636:+ gene-YNCD0018W_CBS436 rna-YNCD0018W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:889751-889839:+ gene-YNCD0018W_CBS6412 rna-YNCD0018W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:920845-920933:+ gene-YNCD0018W_CBS6413 rna-YNCD0018W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:945241-945329:+ gene-YNCD0018W_CENPK1137D rna-YNCD0018W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:903374-903462:+ gene-YNCD0018W_EthanolRed rna-YNCD0018W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:911576-911664:+ gene-YNCD0018W_FaliES1 rna-YNCD0018W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000261.1:44-132:+ gene-YNCD0018W_JAY291 rna-YNCD0018W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:920866-920954:+ gene-YNCD0018W_MUCL30387 rna-YNCD0018W_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:908896-908984:+ gene-YNCD0018W_MUCL30388 rna-YNCD0018W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:894396-894484:+ gene-YNCD0018W_MUCL39482 rna-YNCD0018W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:834162-834250:+ gene-YNCD0018W_MUCL42920 rna-YNCD0018W_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:946235-946323:+ gene-YNCD0018W_NCIM3186 rna-YNCD0018W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:898064-898152:+ gene-YNCD0018W_NCYC1407 rna-YNCD0018W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:914323-914411:+ gene-YNCD0018W_PE2H3 rna-YNCD0018W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:919600-919688:+ gene-YNCD0018W_PE2H4 rna-YNCD0018W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:946312-946400:+ gene-YNCD0018W_S288C rna-YNCD0018W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000013.1:152160-152248:+ gene-YNCD0018W_SA1 rna-YNCD0018W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000063.1:333-421:+ gene-YNCD0018W_1_ThermosaccDry Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:909730-909818:+ gene-YNCD0018W_ThermosaccDry rna-YNCD0018W_ThermosaccDry Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000080.1:252-340:- gene-YNCD0018W_1_VR1 Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000092.1:353-441:+ gene-YNCD0018W_3_VR1 Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000295.1:741-829:+ gene-YNCD0018W_2_VR1 Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:924923-925011:+ gene-YNCD0018W_VR1 rna-YNCD0018W_VR1 Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000007.1:172412-172500:+ gene-YNCD0018W_ZTW1 rna-YNCD0018W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:915045-915133:+ gene-YNCD0018W_Sparadoxus rna-YNCD0018W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files