Gene name: SUM1
Reference locus (S288C): YDR310C
Gene biotype: protein_coding
Description: Suppressor of mar1-1 protein; Transcriptional repressor that regulates middle-sporulation genes; required for mitotic repression of middle sporulation-specific genes; also acts as general replication initiation factor; involved in telomere maintenance, chromatin silencing; regulated by pachytene checkpoint
Top 10 interactors (score): RFM1 (0.998); HST1 (0.996); SIR2 (0.988); IME2 (0.972); NDT80 (0.942); SIR3 (0.941); SIR4 (0.885); SIF2 (0.883); SET3 (0.883); SNT1 (0.878); HOS4 (0.861); CPR1 (0.856); UME6 (0.839); HOS2 (0.818); HHF1 (0.784); RAP1 (0.783); IME1 (0.76); MCM1 (0.731); RPD3 (0.691); SMK1 (0.69)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1033117-1036305:- | gene-YDR310C_AKU4011 | rna-NM_001180618.1_AKU4011 | cds-NP_010596.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:95255-98443:+ | gene-YDR310C_BG1 | rna-NM_001180618.1_BG1 | cds-NP_010596.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1060383-1063571:- | gene-YDR310C_Bruggeman | rna-NM_001180618.1_Bruggeman | cds-NP_010596.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1047388-1050576:- | gene-YDR310C_CAT1 | rna-NM_001180618.1_CAT1 | cds-NP_010596.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1027562-1030750:- | gene-YDR310C_CBS1585 | rna-NM_001180618.1_CBS1585 | cds-NP_010596.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1045930-1049118:- | gene-YDR310C_CBS436 | rna-NM_001180618.1_CBS436 | cds-NP_010596.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1024245-1027433:- | gene-YDR310C_CBS6412 | rna-NM_001180618.1_CBS6412 | cds-NP_010596.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1045482-1048670:- | gene-YDR310C_CBS6413 | rna-NM_001180618.1_CBS6413 | cds-NP_010596.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1079769-1082957:- | gene-YDR310C_CENPK1137D | rna-NM_001180618.1_CENPK1137D | cds-NP_010596.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1031472-1034660:- | gene-YDR310C_EthanolRed | rna-NM_001180618.1_EthanolRed | cds-NP_010596.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1039874-1043062:- | gene-YDR310C_FaliES1 | rna-NM_001180618.1_FaliES1 | cds-NP_010596.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000130.1:57672-60860:- | gene-YDR310C_JAY291 | rna-NM_001180618.1_JAY291 | cds-NP_010596.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1045893-1049081:- | gene-YDR310C_MUCL30387 | rna-NM_001180618.1_MUCL30387 | cds-NP_010596.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1032969-1036157:- | gene-YDR310C_MUCL30388 | rna-NM_001180618.1_MUCL30388 | cds-NP_010596.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1019369-1022557:- | gene-YDR310C_MUCL39482 | rna-NM_001180618.1_MUCL39482 | cds-NP_010596.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:960512-963700:- | gene-YDR310C_MUCL42920 | rna-NM_001180618.1_MUCL42920 | cds-NP_010596.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1081051-1084239:- | gene-YDR310C_NCIM3186 | rna-NM_001180618.1_NCIM3186 | cds-NP_010596.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1032661-1035849:- | gene-YDR310C_NCYC1407 | rna-NM_001180618.1_NCYC1407 | cds-NP_010596.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1043646-1046834:- | gene-YDR310C_PE2H3 | rna-NM_001180618.1_PE2H3 | cds-NP_010596.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1049231-1052419:- | gene-YDR310C_PE2H4 | rna-NM_001180618.1_PE2H4 | cds-NP_010596.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1081128-1084316:- | gene-YDR310C_S288C | rna-NM_001180618.1_S288C | cds-NP_010596.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:57873-61061:- | gene-YDR310C_SA1 | rna-NM_001180618.1_SA1 | cds-NP_010596.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1044147-1047335:- | gene-YDR310C_ThermosaccDry | rna-NM_001180618.1_ThermosaccDry | cds-NP_010596.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1060063-1063251:- | gene-YDR310C_VR1 | rna-NM_001180618.1_VR1 | cds-NP_010596.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:88265-91453:- | gene-YDR310C_ZTW1 | rna-NM_001180618.1_ZTW1 | cds-NP_010596.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1039690-1042872:- | gene-YDR310C_Sparadoxus | rna-NM_001180618.1_Sparadoxus | cds-NP_010596.1_Sparadoxus | 87.9 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |