SUF4 (YNCG0035W)

Gene profile

Gene name: SUF4
Reference locus (S288C): YNCG0035W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:759313-759384:+ gene-YNCG0035W_AKU4011 rna-YNCG0035W_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000021.1:37235-37306:+ gene-YNCG0035W_BG1 rna-YNCG0035W_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:764785-764856:+ gene-YNCG0035W_2_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:101767-101838:- gene-YNCG0035W_3_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000248.1:91-162:- gene-YNCG0035W_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:763276-763347:+ gene-YNCG0035W_Bruggeman rna-YNCG0035W_Bruggeman Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000120.1:641-712:+ gene-YNCG0035W_1_CAT1 Unknown Unknown 100.0 100.0 Unannotated 3 2 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000309.1:565-636:+ gene-YNCG0035W_2_CAT1 Unknown Unknown 100.0 100.0 Unannotated 3 3 0 Unknown Unknown non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:760741-760812:+ gene-YNCG0035W_CAT1 rna-YNCG0035W_CAT1 Unknown 100.0 100.0 Unannotated 3 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:760047-760118:+ gene-YNCG0035W_CBS1585 rna-YNCG0035W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005349.1:763702-763773:+ gene-YNCG0035W_CBS436 rna-YNCG0035W_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:751067-751138:+ gene-YNCG0035W_CBS6412 rna-YNCG0035W_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:756905-756976:+ gene-YNCG0035W_CBS6413 rna-YNCG0035W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:779349-779420:+ gene-YNCG0035W_CENPK1137D rna-YNCG0035W_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:745615-745686:+ gene-YNCG0035W_EthanolRed rna-YNCG0035W_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:749703-749774:+ gene-YNCG0035W_FaliES1 rna-YNCG0035W_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000224.1:7755-7826:- gene-YNCG0035W_JAY291 rna-YNCG0035W_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:762275-762346:+ gene-YNCG0035W_5_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 6 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:762524-762595:+ gene-YNCG0035W_3_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 4 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:100745-100816:- gene-YNCG0035W_2_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000238.1:1035-1106:- gene-YNCG0035W_4_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 5 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000370.1:521-592:+ gene-YNCG0035W_1_MUCL30387 Unknown Unknown 100.0 100.0 Unannotated 6 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:762026-762097:+ gene-YNCG0035W_MUCL30387 rna-YNCG0035W_MUCL30387 Unknown 100.0 100.0 Unannotated 6 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000253.1:77-148:- gene-YNCG0035W_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:762218-762289:+ gene-YNCG0035W_MUCL30388 rna-YNCG0035W_MUCL30388 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:755523-755594:+ gene-YNCG0035W_MUCL39482 rna-YNCG0035W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:74057-74128:- gene-YNCG0035W_2_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 4 3 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:769956-770027:+ gene-YNCG0035W_3_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 4 4 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000193.1:502-573:+ gene-YNCG0035W_1_MUCL42920 Unknown Unknown 100.0 100.0 Unannotated 4 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:767588-767659:+ gene-YNCG0035W_MUCL42920 rna-YNCG0035W_MUCL42920 Unknown 100.0 100.0 Unannotated 4 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:779616-779687:+ gene-YNCG0035W_NCIM3186 rna-YNCG0035W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:750723-750794:+ gene-YNCG0035W_NCYC1407 rna-YNCG0035W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:769726-769797:+ gene-YNCG0035W_PE2H3 rna-YNCG0035W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:774836-774907:+ gene-YNCG0035W_PE2H4 rna-YNCG0035W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:779616-779687:+ gene-YNCG0035W_S288C rna-YNCG0035W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000035.1:14616-14687:+ gene-YNCG0035W_SA1 rna-YNCG0035W_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:770326-770397:+ gene-YNCG0035W_ThermosaccDry rna-YNCG0035W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000253.1:1062-1133:- gene-YNCG0035W_1_VR1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:874351-874422:+ gene-YNCG0035W_VR1 rna-YNCG0035W_VR1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000016.1:72176-72247:+ gene-YNCG0035W_ZTW1 rna-YNCG0035W_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:759576-759647:+ gene-YNCG0035W_Sparadoxus rna-YNCG0035W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files