SUF20 (YNCF0006W)


Gene profile

Gene name: SUF20
Reference locus (S288C): YNCF0006W
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
CAT1 GCA_001738705.1 Bioethanol South America CM005524.1:157755-157825:+ gene-YNCF0006W_CAT1 rna-YNCF0006W_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005364.1:153497-153567:+ gene-YNCF0006W_CBS1585 rna-YNCF0006W_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005316.1:155749-155819:+ gene-YNCF0006W_CBS6413 rna-YNCF0006W_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005444.1:151850-151920:+ gene-YNCF0006W_MUCL30388 rna-YNCF0006W_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005284.1:151940-152010:+ gene-YNCF0006W_MUCL39482 rna-YNCF0006W_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011815.1:162227-162297:+ gene-YNCF0006W_NCIM3186 rna-YNCF0006W_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005268.1:152957-153027:+ gene-YNCF0006W_NCYC1407 rna-YNCF0006W_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994145.1:172030-172100:+ gene-YNCF0006W_PE2H3 rna-YNCF0006W_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999877.1:171578-171648:+ gene-YNCF0006W_PE2H4 rna-YNCF0006W_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001138.5:162228-162298:+ gene-YNCF0006W_S288C rna-YNCF0006W_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005492.1:152467-152537:+ gene-YNCF0006W_ThermosaccDry rna-YNCF0006W_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:167927-167997:+ gene-YNCF0006W_VR1 rna-YNCF0006W_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047492.1:176791-176861:+ gene-YNCF0006W_Sparadoxus rna-YNCF0006W_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files