SUF2 (YNCC0004C)

Gene profile

Gene name: SUF2
Reference locus (S288C): YNCC0004C
Gene biotype: tRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:118287-118358:- gene-YNCC0004C_AKU4011 rna-YNCC0004C_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000196.1:573-644:+ gene-YNCC0004C_1_BG1 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000178.1:27672-27743:+ gene-YNCC0004C_BG1 rna-YNCC0004C_BG1 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:632234-632305:- gene-YNCC0004C_1_Bruggeman Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:114101-114172:- gene-YNCC0004C_Bruggeman rna-YNCC0004C_Bruggeman Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:118620-118691:- gene-YNCC0004C_CAT1 rna-YNCC0004C_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:118936-119007:- gene-YNCC0004C_CBS1585 rna-YNCC0004C_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005345.1:123860-123931:- gene-YNCC0004C_CBS436 rna-YNCC0004C_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:106396-106467:- gene-YNCC0004C_CBS6412 rna-YNCC0004C_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:118243-118314:- gene-YNCC0004C_CBS6413 rna-YNCC0004C_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:123052-123123:- gene-YNCC0004C_CENPK1137D rna-YNCC0004C_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:116305-116376:- gene-YNCC0004C_EthanolRed rna-YNCC0004C_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:118603-118674:- gene-YNCC0004C_FaliES1 rna-YNCC0004C_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000126.1:32777-32848:- gene-YNCC0004C_JAY291 rna-YNCC0004C_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:111318-111389:- gene-YNCC0004C_MUCL30387 rna-YNCC0004C_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000197.1:164-235:- gene-YNCC0004C_1_MUCL30388 Unknown Unknown 100.0 100.0 Unannotated 2 2 0 Unknown Unknown non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:110875-110946:- gene-YNCC0004C_MUCL30388 rna-YNCC0004C_MUCL30388 Unknown 100.0 100.0 Unannotated 2 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:119353-119424:- gene-YNCC0004C_MUCL39482 rna-YNCC0004C_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:114593-114664:- gene-YNCC0004C_MUCL42920 rna-YNCC0004C_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:123209-123280:- gene-YNCC0004C_NCIM3186 rna-YNCC0004C_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:119836-119907:- gene-YNCC0004C_NCYC1407 rna-YNCC0004C_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:124008-124079:- gene-YNCC0004C_PE2H3 rna-YNCC0004C_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:123973-124044:- gene-YNCC0004C_PE2H4 rna-YNCC0004C_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:123577-123648:- gene-YNCC0004C_S288C rna-YNCC0004C_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000073.1:27683-27754:+ gene-YNCC0004C_SA1 rna-YNCC0004C_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:119171-119242:- gene-YNCC0004C_ThermosaccDry rna-YNCC0004C_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:129846-129917:- gene-YNCC0004C_VR1 rna-YNCC0004C_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:118108-118179:- gene-YNCC0004C_ZTW1 rna-YNCC0004C_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:149036-149107:- gene-YNCC0004C_Sparadoxus rna-YNCC0004C_Sparadoxus Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files