Gene name: SUA7
Reference locus (S288C): YPR086W
Gene biotype: protein_coding
Description: Transcription factor TFIIB; a general transcription factor required for transcription initiation and start site selection by RNA polymerase II; Belongs to the TFIIB family
Top 10 interactors (score): RPB5 (0.999); RPB11 (0.999); RPB2 (0.999); TFG2 (0.999); RPB7 (0.999); RPO21 (0.999); DST1 (0.999); RPB9 (0.999); TAF1 (0.999); RPB8 (0.999); RPO26 (0.999); FCP1 (0.999); TFA1 (0.999); RPB3 (0.999); TOA1 (0.999); SPT15 (0.999); SSL2 (0.999); TFG1 (0.999); TFA2 (0.999); SSU72 (0.998)
Homologues (species, bitscore): GTF2B (Homo sapiens, 184.1); Gtf2b (Mus musculus, 184.1); gtf2b (Danio rerio, 190.3); gtf2b (Xenopus tropicalis, 189.1); TfIIB (Drosophila melanogaster, 185.7); ttb-1 (Caenorhabditis elegans, 172.6); AT3G10330 (Arabidopsis thaliana, 146.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:681783-682820:+ | gene-YPR086W_AKU4011 | rna-NM_001184183.1_AKU4011 | cds-NP_015411.1_AKU4011 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:214858-215895:- | gene-YPR086W_BG1 | rna-NM_001184183.1_BG1 | cds-NP_015411.1_BG1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:759462-760499:+ | gene-YPR086W_Bruggeman | rna-NM_001184183.1_Bruggeman | cds-NP_015411.1_Bruggeman | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:803763-804800:+ | gene-YPR086W_CAT1 | rna-NM_001184183.1_CAT1 | cds-NP_015411.1_CAT1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:685709-686746:+ | gene-YPR086W_CBS1585 | rna-NM_001184183.1_CBS1585 | cds-NP_015411.1_CBS1585 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:700334-701371:+ | gene-YPR086W_CBS436 | rna-NM_001184183.1_CBS436 | cds-NP_015411.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:688845-689882:+ | gene-YPR086W_CBS6412 | rna-NM_001184183.1_CBS6412 | cds-NP_015411.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:682666-683703:+ | gene-YPR086W_CBS6413 | rna-NM_001184183.1_CBS6413 | cds-NP_015411.1_CBS6413 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:710080-711117:+ | gene-YPR086W_CENPK1137D | rna-NM_001184183.1_CENPK1137D | cds-NP_015411.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1008782-1009819:+ | gene-YPR086W_EthanolRed | rna-NM_001184183.1_EthanolRed | cds-NP_015411.1_EthanolRed | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:687615-688652:+ | gene-YPR086W_FaliES1 | rna-NM_001184183.1_FaliES1 | cds-NP_015411.1_FaliES1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000094.1:9507-10544:+ | gene-YPR086W_JAY291 | rna-NM_001184183.1_JAY291 | cds-NP_015411.1_JAY291 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:700721-701758:+ | gene-YPR086W_MUCL30387 | rna-NM_001184183.1_MUCL30387 | cds-NP_015411.1_MUCL30387 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:699410-700447:+ | gene-YPR086W_MUCL30388 | rna-NM_001184183.1_MUCL30388 | cds-NP_015411.1_MUCL30388 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:678716-679753:+ | gene-YPR086W_MUCL39482 | rna-NM_001184183.1_MUCL39482 | cds-NP_015411.1_MUCL39482 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:741562-742599:+ | gene-YPR086W_MUCL42920 | rna-NM_001184183.1_MUCL42920 | cds-NP_015411.1_MUCL42920 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:710084-711121:+ | gene-YPR086W_NCIM3186 | rna-NM_001184183.1_NCIM3186 | cds-NP_015411.1_NCIM3186 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:687142-688179:+ | gene-YPR086W_NCYC1407 | rna-NM_001184183.1_NCYC1407 | cds-NP_015411.1_NCYC1407 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:693543-694580:+ | gene-YPR086W_PE2H3 | rna-NM_001184183.1_PE2H3 | cds-NP_015411.1_PE2H3 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:693191-694228:+ | gene-YPR086W_PE2H4 | rna-NM_001184183.1_PE2H4 | cds-NP_015411.1_PE2H4 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:710101-711138:+ | gene-YPR086W_S288C | rna-NM_001184183.1_S288C | cds-NP_015411.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000028.1:8220-9257:+ | gene-YPR086W_SA1 | rna-NM_001184183.1_SA1 | cds-NP_015411.1_SA1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:687390-688427:+ | gene-YPR086W_ThermosaccDry | rna-NM_001184183.1_ThermosaccDry | cds-NP_015411.1_ThermosaccDry | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:704032-705069:+ | gene-YPR086W_VR1 | rna-NM_001184183.1_VR1 | cds-NP_015411.1_VR1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:686609-687646:+ | gene-YPR086W_ZTW1 | rna-NM_001184183.1_ZTW1 | cds-NP_015411.1_ZTW1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:687349-688386:+ | gene-YPR086W_Sparadoxus | rna-NM_001184183.1_Sparadoxus | cds-NP_015411.1_Sparadoxus | 92.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |