Gene name: STU2
Reference locus (S288C): YLR045C
Gene biotype: protein_coding
Description: Protein STU2; Microtubule-associated protein (MAP) of the XMAP215/Dis1 family; regulates microtubule dynamics during spindle orientation and metaphase chromosome alignment; interacts with spindle pole body component Spc72p; Belongs to the TOG/XMAP215 family
Top 10 interactors (score): NDC80 (0.999); TUB2 (0.999); BIM1 (0.999); BIK1 (0.998); TUB1 (0.998); PAC1 (0.995); IPL1 (0.989); KIP3 (0.988); BUB3 (0.986); TUB3 (0.986); KAR3 (0.981); CIN8 (0.98); CRM1 (0.978); SMC1 (0.976); SPC72 (0.974); KAR9 (0.967); MSN5 (0.966); SEC13 (0.963); PXR1 (0.962); MAD2 (0.961)
Homologues (species, bitscore): CKAP5 (Homo sapiens, 148.3); Ckap5 (Mus musculus, 152.5); ckap5 (Danio rerio, 153.3); ckap5 (Xenopus tropicalis, 152.1); msps (Drosophila melanogaster, 153.3); zyg-9 (Caenorhabditis elegans, 73.6); MOR1 (Arabidopsis thaliana, 139.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:217524-220190:- | gene-YLR045C_AKU4011 | rna-NM_001181932.1_AKU4011 | cds-NP_013146.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:180662-183328:- | gene-YLR045C_BG1 | rna-NM_001181932.1_BG1 | cds-NP_013146.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:227434-230100:- | gene-YLR045C_Bruggeman | rna-NM_001181932.1_Bruggeman | cds-NP_013146.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:227759-230425:- | gene-YLR045C_CAT1 | rna-NM_001181932.1_CAT1 | cds-NP_013146.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:224662-227328:- | gene-YLR045C_CBS1585 | rna-NM_001181932.1_CBS1585 | cds-NP_013146.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:215297-217963:- | gene-YLR045C_CBS436 | rna-NM_001181932.1_CBS436 | cds-NP_013146.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:223071-225737:- | gene-YLR045C_CBS6412 | rna-NM_001181932.1_CBS6412 | cds-NP_013146.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:224923-227589:- | gene-YLR045C_CBS6413 | rna-NM_001181932.1_CBS6413 | cds-NP_013146.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:214328-216994:- | gene-YLR045C_CENPK1137D | rna-NM_001181932.1_CENPK1137D | cds-NP_013146.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:217040-219706:- | gene-YLR045C_EthanolRed | rna-NM_001181932.1_EthanolRed | cds-NP_013146.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:216926-219592:- | gene-YLR045C_FaliES1 | rna-NM_001181932.1_FaliES1 | cds-NP_013146.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000238.1:5412-8077:+ | gene-YLR045C_JAY291 | rna-NM_001181932.1_JAY291 | cds-NP_013146.1_JAY291 | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:224786-227452:- | gene-YLR045C_MUCL30387 | rna-NM_001181932.1_MUCL30387 | cds-NP_013146.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:232450-235116:- | gene-YLR045C_MUCL30388 | rna-NM_001181932.1_MUCL30388 | cds-NP_013146.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:225157-227823:- | gene-YLR045C_MUCL39482 | rna-NM_001181932.1_MUCL39482 | cds-NP_013146.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:225063-227729:- | gene-YLR045C_MUCL42920 | rna-NM_001181932.1_MUCL42920 | cds-NP_013146.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:235011-237677:- | gene-YLR045C_NCIM3186 | rna-NM_001181932.1_NCIM3186 | cds-NP_013146.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:217216-219882:- | gene-YLR045C_NCYC1407 | rna-NM_001181932.1_NCYC1407 | cds-NP_013146.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:223085-225751:- | gene-YLR045C_PE2H3 | rna-NM_001181932.1_PE2H3 | cds-NP_013146.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:222826-225492:- | gene-YLR045C_PE2H4 | rna-NM_001181932.1_PE2H4 | cds-NP_013146.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:235037-237703:- | gene-YLR045C_S288C | rna-NM_001181932.1_S288C | cds-NP_013146.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000046.1:60928-63594:- | gene-YLR045C_SA1 | rna-NM_001181932.1_SA1 | cds-NP_013146.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:217114-219780:- | gene-YLR045C_ThermosaccDry | rna-NM_001181932.1_ThermosaccDry | cds-NP_013146.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:230533-233199:- | gene-YLR045C_VR1 | rna-NM_001181932.1_VR1 | cds-NP_013146.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:216471-219137:- | gene-YLR045C_ZTW1 | rna-NM_001181932.1_ZTW1 | cds-NP_013146.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:225350-228016:- | gene-YLR045C_Sparadoxus | rna-NM_001181932.1_Sparadoxus | cds-NP_013146.1_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |