Gene name: STU1
Reference locus (S288C): YBL034C
Gene biotype: protein_coding
Description: Protein STU1; Component of the mitotic spindle; binds to interpolar microtubules via its association with beta-tubulin (Tub2p); required for interpolar microtubules to provide an outward force on the spindle poles; Belongs to the CLASP family
Top 10 interactors (score): TUB2 (0.987); ASE1 (0.98); BIM1 (0.978); STU2 (0.955); CIN8 (0.91); BIK1 (0.884); KAR3 (0.881); SPC105 (0.864); KIP3 (0.839); TUB1 (0.809); DAM1 (0.8); MAD2 (0.792); NUF2 (0.785); TOG1 (0.779); DYN1 (0.777); TUB3 (0.776); DAD1 (0.719); PLP2 (0.714); TUB4 (0.699); SPC24 (0.69)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:147463-152004:- | gene-YBL034C_AKU4011 | rna-NM_001178274.1_AKU4011 | cds-NP_009519.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:138283-142824:- | gene-YBL034C_BG1 | rna-NM_001178274.1_BG1 | cds-NP_009519.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:148046-152587:- | gene-YBL034C_Bruggeman | rna-NM_001178274.1_Bruggeman | cds-NP_009519.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:150679-155220:- | gene-YBL034C_CAT1 | rna-NM_001178274.1_CAT1 | cds-NP_009519.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:140003-144544:- | gene-YBL034C_CBS1585 | rna-NM_001178274.1_CBS1585 | cds-NP_009519.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:148514-153055:- | gene-YBL034C_CBS436 | rna-NM_001178274.1_CBS436 | cds-NP_009519.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:238759-243300:- | gene-YBL034C_CBS6412 | rna-NM_001178274.1_CBS6412 | cds-NP_009519.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:145574-150115:- | gene-YBL034C_CBS6413 | rna-NM_001178274.1_CBS6413 | cds-NP_009519.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:147596-152137:- | gene-YBL034C_CENPK1137D | rna-NM_001178274.1_CENPK1137D | cds-NP_009519.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:161423-165964:- | gene-YBL034C_EthanolRed | rna-NM_001178274.1_EthanolRed | cds-NP_009519.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:162270-166811:- | gene-YBL034C_FaliES1 | rna-NM_001178274.1_FaliES1 | cds-NP_009519.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:64907-69448:- | gene-YBL034C_JAY291 | rna-NM_001178274.1_JAY291 | cds-NP_009519.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:147425-151966:- | gene-YBL034C_MUCL30387 | rna-NM_001178274.1_MUCL30387 | cds-NP_009519.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:148696-153237:- | gene-YBL034C_MUCL30388 | rna-NM_001178274.1_MUCL30388 | cds-NP_009519.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:140178-144719:- | gene-YBL034C_MUCL39482 | rna-NM_001178274.1_MUCL39482 | cds-NP_009519.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:147010-151551:- | gene-YBL034C_MUCL42920 | rna-NM_001178274.1_MUCL42920 | cds-NP_009519.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:153645-158186:- | gene-YBL034C_NCIM3186 | rna-NM_001178274.1_NCIM3186 | cds-NP_009519.1_NCIM3186 | 95.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:141315-145856:- | gene-YBL034C_NCYC1407 | rna-NM_001178274.1_NCYC1407 | cds-NP_009519.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:147584-152125:- | gene-YBL034C_PE2H3 | rna-NM_001178274.1_PE2H3 | cds-NP_009519.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:145228-149769:- | gene-YBL034C_PE2H4 | rna-NM_001178274.1_PE2H4 | cds-NP_009519.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:153848-158389:- | gene-YBL034C_S288C | rna-NM_001178274.1_S288C | cds-NP_009519.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:38435-42976:- | gene-YBL034C_SA1 | rna-NM_001178274.1_SA1 | cds-NP_009519.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:162223-166764:- | gene-YBL034C_ThermosaccDry | rna-NM_001178274.1_ThermosaccDry | cds-NP_009519.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:144413-148954:- | gene-YBL034C_VR1 | rna-NM_001178274.1_VR1 | cds-NP_009519.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:138943-143484:- | gene-YBL034C_ZTW1 | rna-NM_001178274.1_ZTW1 | cds-NP_009519.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:173825-178378:- | gene-YBL034C_Sparadoxus | rna-NM_001178274.1_Sparadoxus | cds-NP_009519.1_Sparadoxus | 88.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |