Gene name: STT4
Reference locus (S288C): YLR305C
Gene biotype: protein_coding
Description: Phosphatidylinositol-4-kinase; functions in the Pkc1p protein kinase pathway; required for normal vacuole morphology, cell wall integrity, and actin cytoskeleton organization; Belongs to the PI3/PI4-kinase family. Type III PI4K subfamily
Top 10 interactors (score): MSS4 (0.999); SAC1 (0.999); LSB6 (0.998); EFR3 (0.997); FAB1 (0.993); PIK1 (0.983); SCS2 (0.975); INP53 (0.974); PIS1 (0.974); INP52 (0.97); YPP1 (0.966); INP51 (0.957); PLC1 (0.956); VPS34 (0.949); TEP1 (0.945); SEC14 (0.943); YMR1 (0.938); SFK1 (0.936); OSH2 (0.9); SPO14 (0.878)
Homologues (species, bitscore): PI4KA (Homo sapiens, 516.9); Pi4ka (Mus musculus, 513.8); pi4kaa (Danio rerio, 498.8); pi4ka (Xenopus tropicalis, 513.5); Pi4KIIIalpha (Drosophila melanogaster, 484.2); Y75B8A.24 (Caenorhabditis elegans, 462.6); PI4KA1 (Arabidopsis thaliana, 395.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:686608-692310:- | gene-YLR305C_AKU4011 | rna-NM_001182193.1_AKU4011 | cds-NP_013408.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:40314-46016:+ | gene-YLR305C_BG1 | rna-NM_001182193.1_BG1 | cds-NP_013408.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:722438-728140:- | gene-YLR305C_Bruggeman | rna-NM_001182193.1_Bruggeman | cds-NP_013408.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:720611-726313:- | gene-YLR305C_CAT1 | rna-NM_001182193.1_CAT1 | cds-NP_013408.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:721534-727236:- | gene-YLR305C_CBS1585 | rna-NM_001182193.1_CBS1585 | cds-NP_013408.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:706151-711853:- | gene-YLR305C_CBS436 | rna-NM_001182193.1_CBS436 | cds-NP_013408.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:684174-689876:- | gene-YLR305C_CBS6412 | rna-NM_001182193.1_CBS6412 | cds-NP_013408.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:722200-727902:- | gene-YLR305C_CBS6413 | rna-NM_001182193.1_CBS6413 | cds-NP_013408.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:722775-728477:- | gene-YLR305C_CENPK1137D | rna-NM_001182193.1_CENPK1137D | cds-NP_013408.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:679886-685588:- | gene-YLR305C_EthanolRed | rna-NM_001182193.1_EthanolRed | cds-NP_013408.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:709086-714788:- | gene-YLR305C_FaliES1 | rna-NM_001182193.1_FaliES1 | cds-NP_013408.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000296.1:53033-58735:+ | gene-YLR305C_JAY291 | rna-NM_001182193.1_JAY291 | cds-NP_013408.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:721672-727374:- | gene-YLR305C_MUCL30387 | rna-NM_001182193.1_MUCL30387 | cds-NP_013408.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:727255-732957:- | gene-YLR305C_MUCL30388 | rna-NM_001182193.1_MUCL30388 | cds-NP_013408.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:722764-728466:- | gene-YLR305C_MUCL39482 | rna-NM_001182193.1_MUCL39482 | cds-NP_013408.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:717921-723623:- | gene-YLR305C_MUCL42920 | rna-NM_001182193.1_MUCL42920 | cds-NP_013408.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:738135-743837:- | gene-YLR305C_NCIM3186 | rna-NM_001182193.1_NCIM3186 | cds-NP_013408.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:732106-737808:- | gene-YLR305C_NCYC1407 | rna-NM_001182193.1_NCYC1407 | cds-NP_013408.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:719918-725620:- | gene-YLR305C_PE2H3 | rna-NM_001182193.1_PE2H3 | cds-NP_013408.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:719662-725364:- | gene-YLR305C_PE2H4 | rna-NM_001182193.1_PE2H4 | cds-NP_013408.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:738161-743863:- | gene-YLR305C_S288C | rna-NM_001182193.1_S288C | cds-NP_013408.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:40440-46142:+ | gene-YLR305C_SA1 | rna-NM_001182193.1_SA1 | cds-NP_013408.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:710980-716682:- | gene-YLR305C_ThermosaccDry | rna-NM_001182193.1_ThermosaccDry | cds-NP_013408.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:723129-728831:- | gene-YLR305C_VR1 | rna-NM_001182193.1_VR1 | cds-NP_013408.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:49407-55109:- | gene-YLR305C_ZTW1 | rna-NM_001182193.1_ZTW1 | cds-NP_013408.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:697081-702783:- | gene-YLR305C_Sparadoxus | rna-NM_001182193.1_Sparadoxus | cds-NP_013408.1_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |