Gene name: STS1
Reference locus (S288C): YIR011C
Gene biotype: protein_coding
Description: Tethering factor for nuclear proteasome STS1; Protein required for localizing proteasomes to the nucleus; involved in cotranslational protein degradation; mediates interaction between nuclear import factor Srp1p and the proteasome; Sts1p and Srp1p couple proteasomes to nascent polypeptides emerging from the ribosome for cotranslational degradation; involved in ubiquitin-mediated protein degradation; Belongs to the cut8/STS1 family
Top 10 interactors (score): SRP1 (0.931); RPN11 (0.895); RNA14 (0.786); RNA15 (0.784); CTF13 (0.726); CBF2 (0.65); RPN1 (0.59); RPN7 (0.539); UMP1 (0.526); TFB4 (0.515); RPN12 (0.515); RAD23 (0.428); PRE6 (0.42); RPN10 (0.403)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:376623-377582:- | gene-YIR011C_AKU4011 | rna-NM_001179533.1_AKU4011 | cds-NP_012276.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:48986-49945:+ | gene-YIR011C_BG1 | rna-NM_001179533.1_BG1 | cds-NP_012276.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:381048-382007:- | gene-YIR011C_Bruggeman | rna-NM_001179533.1_Bruggeman | cds-NP_012276.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:367761-368720:- | gene-YIR011C_CAT1 | rna-NM_001179533.1_CAT1 | cds-NP_012276.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:376658-377617:- | gene-YIR011C_CBS1585 | rna-NM_001179533.1_CBS1585 | cds-NP_012276.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:369331-370290:- | gene-YIR011C_CBS436 | rna-NM_001179533.1_CBS436 | cds-NP_012276.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:372141-373100:- | gene-YIR011C_CBS6412 | rna-NM_001179533.1_CBS6412 | cds-NP_012276.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:368735-369694:- | gene-YIR011C_CBS6413 | rna-NM_001179533.1_CBS6413 | cds-NP_012276.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:369346-370305:- | gene-YIR011C_CENPK1137D | rna-NM_001179533.1_CENPK1137D | cds-NP_012276.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:359707-360666:- | gene-YIR011C_EthanolRed | rna-NM_001179533.1_EthanolRed | cds-NP_012276.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:378434-379393:- | gene-YIR011C_FaliES1 | rna-NM_001179533.1_FaliES1 | cds-NP_012276.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000009.1:12572-13531:+ | gene-YIR011C_JAY291 | rna-NM_001179533.1_JAY291 | cds-NP_012276.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:378292-379251:- | gene-YIR011C_MUCL30387 | rna-NM_001179533.1_MUCL30387 | cds-NP_012276.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:375073-376032:- | gene-YIR011C_MUCL30388 | rna-NM_001179533.1_MUCL30388 | cds-NP_012276.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:377293-378252:- | gene-YIR011C_MUCL39482 | rna-NM_001179533.1_MUCL39482 | cds-NP_012276.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:380859-381818:- | gene-YIR011C_MUCL42920 | rna-NM_001179533.1_MUCL42920 | cds-NP_012276.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:377287-378246:- | gene-YIR011C_NCIM3186 | rna-NM_001179533.1_NCIM3186 | cds-NP_012276.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:381520-382479:- | gene-YIR011C_NCYC1407 | rna-NM_001179533.1_NCYC1407 | cds-NP_012276.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:371341-372300:- | gene-YIR011C_PE2H3 | rna-NM_001179533.1_PE2H3 | cds-NP_012276.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:366047-367006:- | gene-YIR011C_PE2H4 | rna-NM_001179533.1_PE2H4 | cds-NP_012276.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:377287-378246:- | gene-YIR011C_S288C | rna-NM_001179533.1_S288C | cds-NP_012276.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000066.1:52148-53107:- | gene-YIR011C_SA1 | rna-NM_001179533.1_SA1 | cds-NP_012276.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:376038-376997:- | gene-YIR011C_ThermosaccDry | rna-NM_001179533.1_ThermosaccDry | cds-NP_012276.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:372116-373075:- | gene-YIR011C_VR1 | rna-NM_001179533.1_VR1 | cds-NP_012276.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:350034-350993:- | gene-YIR011C_ZTW1 | rna-NM_001179533.1_ZTW1 | cds-NP_012276.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:371440-372396:- | gene-YIR011C_Sparadoxus | rna-NM_001179533.1_Sparadoxus | cds-NP_012276.1_Sparadoxus | 91.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |