Gene name: STR3
Reference locus (S288C): YGL184C
Gene biotype: protein_coding
Description: Peroxisomal cystathionine beta-lyase; converts cystathionine into homocysteine; may be redox regulated by Gto1p; involved in the release of the aromatic thiol 3-mercaptohexanol during wine fermentation; Belongs to the trans-sulfuration enzymes family
Top 10 interactors (score): CYS4 (0.994); STR2 (0.994); YLL058W (0.99); SAH1 (0.983); MET6 (0.98); GSH1 (0.972); TUM1 (0.965); MHT1 (0.956); AAT1 (0.954); AAT2 (0.954); MCY1 (0.953); MET28 (0.951); MET2 (0.945); MET17 (0.938); YML082W (0.936); HOM6 (0.934); CYS3 (0.927); MET1 (0.925); SAM4 (0.915); MET13 (0.893)
Homologues (species, bitscore): CTH (Homo sapiens, 184.5); Cth (Mus musculus, 191.8); cth (Danio rerio, 205.7); cth (Xenopus tropicalis, 189.5); Eip55E (Drosophila melanogaster, 204.5); cth-2 (Caenorhabditis elegans, 214.5); CBL (Arabidopsis thaliana, 259.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:157153-158550:- | gene-YGL184C_AKU4011 | rna-NM_001181049.3_AKU4011 | cds-NP_011331.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:251892-253289:+ | gene-YGL184C_BG1 | rna-NM_001181049.3_BG1 | cds-NP_011331.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:159387-160784:- | gene-YGL184C_Bruggeman | rna-NM_001181049.3_Bruggeman | cds-NP_011331.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:155249-156646:- | gene-YGL184C_CAT1 | rna-NM_001181049.3_CAT1 | cds-NP_011331.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:160292-161689:- | gene-YGL184C_CBS1585 | rna-NM_001181049.3_CBS1585 | cds-NP_011331.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:155268-156665:- | gene-YGL184C_CBS436 | rna-NM_001181049.3_CBS436 | cds-NP_011331.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:147070-148467:- | gene-YGL184C_CBS6412 | rna-NM_001181049.3_CBS6412 | cds-NP_011331.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:154605-156002:- | gene-YGL184C_CBS6413 | rna-NM_001181049.3_CBS6413 | cds-NP_011331.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:154804-156201:- | gene-YGL184C_CENPK1137D | rna-NM_001181049.3_CENPK1137D | cds-NP_011331.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:147139-148490:- | gene-YGL184C_EthanolRed | rna-NM_001181049.3_EthanolRed | cds-NP_011331.3_EthanolRed | 95.2 | 96.7 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:148139-149536:- | gene-YGL184C_FaliES1 | rna-NM_001181049.3_FaliES1 | cds-NP_011331.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000397.1:73458-74855:- | gene-YGL184C_JAY291 | rna-NM_001181049.3_JAY291 | cds-NP_011331.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:156623-158020:- | gene-YGL184C_MUCL30387 | rna-NM_001181049.3_MUCL30387 | cds-NP_011331.3_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:159724-161121:- | gene-YGL184C_MUCL30388 | rna-NM_001181049.3_MUCL30388 | cds-NP_011331.3_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:157302-158699:- | gene-YGL184C_MUCL39482 | rna-NM_001181049.3_MUCL39482 | cds-NP_011331.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:159930-161327:- | gene-YGL184C_MUCL42920 | rna-NM_001181049.3_MUCL42920 | cds-NP_011331.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:154615-156012:- | gene-YGL184C_NCIM3186 | rna-NM_001181049.3_NCIM3186 | cds-NP_011331.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:148783-150180:- | gene-YGL184C_NCYC1407 | rna-NM_001181049.3_NCYC1407 | cds-NP_011331.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:150770-152167:- | gene-YGL184C_PE2H3 | rna-NM_001181049.3_PE2H3 | cds-NP_011331.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:150318-151715:- | gene-YGL184C_PE2H4 | rna-NM_001181049.3_PE2H4 | cds-NP_011331.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:154615-156012:- | gene-YGL184C_S288C | rna-NM_001181049.3_S288C | cds-NP_011331.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000067.1:14371-15768:- | gene-YGL184C_SA1 | rna-NM_001181049.3_SA1 | cds-NP_011331.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:148401-149798:- | gene-YGL184C_ThermosaccDry | rna-NM_001181049.3_ThermosaccDry | cds-NP_011331.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:155674-157071:- | gene-YGL184C_VR1 | rna-NM_001181049.3_VR1 | cds-NP_011331.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:146933-148330:- | gene-YGL184C_ZTW1 | rna-NM_001181049.3_ZTW1 | cds-NP_011331.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:153778-155175:- | gene-YGL184C_Sparadoxus | rna-NM_001181049.3_Sparadoxus | cds-NP_011331.3_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |