Gene name: STR2
Reference locus (S288C): YJR130C
Gene biotype: protein_coding
Description: Cystathionine gamma-synthase, converts cysteine into cystathionine; STR2 has a paralog, YML082W, that arose from the whole genome duplication; Belongs to the trans-sulfuration enzymes family. MET7 subfamily
Top 10 interactors (score): STR3 (0.994); CYS4 (0.992); MET6 (0.982); MET2 (0.976); SAM4 (0.961); THR1 (0.951); MHT1 (0.951); MCY1 (0.95); CYS3 (0.946); SAH1 (0.938); MET5 (0.936); HOM6 (0.936); BAT2 (0.923); MET17 (0.921); MET10 (0.921); BAT1 (0.911); ILV1 (0.907); YML082W (0.905); YLL058W (0.904); IRC7 (0.9)
Homologues (species, bitscore): Cth (Mus musculus, 57.0); cth (Danio rerio, 58.9); cth (Xenopus tropicalis, 51.6); Eip55E (Drosophila melanogaster, 72.8); cth-1 (Caenorhabditis elegans, 57.4); MGL (Arabidopsis thaliana, 62.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:636716-638635:- | gene-YJR130C_AKU4011 | rna-NM_001181788.1_AKU4011 | cds-NP_012664.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000076.1:34966-36885:+ | gene-YJR130C_BG1 | rna-NM_001181788.1_BG1 | cds-NP_012664.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:652435-654354:- | gene-YJR130C_Bruggeman | rna-NM_001181788.1_Bruggeman | cds-NP_012664.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:657088-659007:- | gene-YJR130C_CAT1 | rna-NM_001181788.1_CAT1 | cds-NP_012664.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:648760-650679:- | gene-YJR130C_CBS1585 | rna-NM_001181788.1_CBS1585 | cds-NP_012664.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:667631-669550:- | gene-YJR130C_CBS436 | rna-NM_001181788.1_CBS436 | cds-NP_012664.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:635537-637456:- | gene-YJR130C_CBS6412 | rna-NM_001181788.1_CBS6412 | cds-NP_012664.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:638192-640111:- | gene-YJR130C_CBS6413 | rna-NM_001181788.1_CBS6413 | cds-NP_012664.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:647578-649497:- | gene-YJR130C_CENPK1137D | rna-NM_001181788.1_CENPK1137D | cds-NP_012664.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:641134-643053:- | gene-YJR130C_EthanolRed | rna-NM_001181788.1_EthanolRed | cds-NP_012664.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:652597-654516:- | gene-YJR130C_FaliES1 | rna-NM_001181788.1_FaliES1 | cds-NP_012664.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:34638-36557:+ | gene-YJR130C_JAY291 | rna-NM_001181788.1_JAY291 | cds-NP_012664.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:651230-653149:- | gene-YJR130C_MUCL30387 | rna-NM_001181788.1_MUCL30387 | cds-NP_012664.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:648953-650872:- | gene-YJR130C_MUCL30388 | rna-NM_001181788.1_MUCL30388 | cds-NP_012664.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:642243-644162:- | gene-YJR130C_MUCL39482 | rna-NM_001181788.1_MUCL39482 | cds-NP_012664.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:646980-648899:- | gene-YJR130C_MUCL42920 | rna-NM_001181788.1_MUCL42920 | cds-NP_012664.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:665197-667116:- | gene-YJR130C_NCIM3186 | rna-NM_001181788.1_NCIM3186 | cds-NP_012664.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:639794-641713:- | gene-YJR130C_NCYC1407 | rna-NM_001181788.1_NCYC1407 | cds-NP_012664.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:657983-659902:- | gene-YJR130C_PE2H3 | rna-NM_001181788.1_PE2H3 | cds-NP_012664.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:651672-653591:- | gene-YJR130C_PE2H4 | rna-NM_001181788.1_PE2H4 | cds-NP_012664.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:665218-667137:- | gene-YJR130C_S288C | rna-NM_001181788.1_S288C | cds-NP_012664.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000069.1:34991-36910:+ | gene-YJR130C_SA1 | rna-NM_001181788.1_SA1 | cds-NP_012664.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:646528-648447:- | gene-YJR130C_ThermosaccDry | rna-NM_001181788.1_ThermosaccDry | cds-NP_012664.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:648905-650824:- | gene-YJR130C_VR1 | rna-NM_001181788.1_VR1 | cds-NP_012664.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:625880-627799:- | gene-YJR130C_ZTW1 | rna-NM_001181788.1_ZTW1 | cds-NP_012664.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:660088-662007:- | gene-YJR130C_Sparadoxus | rna-NM_001181788.1_Sparadoxus | cds-NP_012664.1_Sparadoxus | 89.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |