Gene name: STP2
Reference locus (S288C): YHR006W
Gene biotype: protein_coding
Description: Transcription factor; activated by proteolytic processing in response to signals from the SPS sensor system for external amino acids; activates transcription of amino acid permease genes; STP2 has a paralog, STP1, that arose from the whole genome duplication
Top 10 interactors (score): PTR3 (0.949); SSY1 (0.933); SSY5 (0.933); ASI1 (0.835); ASI3 (0.815); ASI2 (0.811); DAL81 (0.784); STP1 (0.769); GRR1 (0.723); AGP1 (0.705); GLN3 (0.701); GAP1 (0.655); BAP2 (0.65); AVT5 (0.619); BAP3 (0.618); PDR3 (0.574); YCK1 (0.574); HAP5 (0.568); DUR1,2 (0.567); SMP3 (0.563)
Homologues (species, bitscore): HKR1 (Homo sapiens, 50.4); e4f1 (Xenopus tropicalis, 50.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:106080-107705:+ | gene-YHR006W_AKU4011 | rna-NM_001179136.1_AKU4011 | cds-NP_011870.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:25795-27420:+ | gene-YHR006W_BG1 | rna-NM_001179136.1_BG1 | cds-NP_011870.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:112937-114562:+ | gene-YHR006W_Bruggeman | rna-NM_001179136.1_Bruggeman | cds-NP_011870.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:107170-108795:+ | gene-YHR006W_CAT1 | rna-NM_001179136.1_CAT1 | cds-NP_011870.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:106667-108292:+ | gene-YHR006W_CBS1585 | rna-NM_001179136.1_CBS1585 | cds-NP_011870.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:99506-101131:+ | gene-YHR006W_CBS436 | rna-NM_001179136.1_CBS436 | cds-NP_011870.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:106264-107889:+ | gene-YHR006W_CBS6412 | rna-NM_001179136.1_CBS6412 | cds-NP_011870.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:105992-107617:+ | gene-YHR006W_CBS6413 | rna-NM_001179136.1_CBS6413 | cds-NP_011870.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:110624-112249:+ | gene-YHR006W_CENPK1137D | rna-NM_001179136.1_CENPK1137D | cds-NP_011870.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:106073-107698:+ | gene-YHR006W_EthanolRed | rna-NM_001179136.1_EthanolRed | cds-NP_011870.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:106852-108477:+ | gene-YHR006W_FaliES1 | rna-NM_001179136.1_FaliES1 | cds-NP_011870.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000064.1:13731-15356:- | gene-YHR006W_JAY291 | rna-NM_001179136.1_JAY291 | cds-NP_011870.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:110465-112090:+ | gene-YHR006W_MUCL30387 | rna-NM_001179136.1_MUCL30387 | cds-NP_011870.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:112362-113987:+ | gene-YHR006W_MUCL30388 | rna-NM_001179136.1_MUCL30388 | cds-NP_011870.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:105693-107318:+ | gene-YHR006W_MUCL39482 | rna-NM_001179136.1_MUCL39482 | cds-NP_011870.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:110503-112128:+ | gene-YHR006W_MUCL42920 | rna-NM_001179136.1_MUCL42920 | cds-NP_011870.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:117696-119321:+ | gene-YHR006W_NCIM3186 | rna-NM_001179136.1_NCIM3186 | cds-NP_011870.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:105109-106734:+ | gene-YHR006W_NCYC1407 | rna-NM_001179136.1_NCYC1407 | cds-NP_011870.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:107314-108939:+ | gene-YHR006W_PE2H3 | rna-NM_001179136.1_PE2H3 | cds-NP_011870.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:114755-116380:+ | gene-YHR006W_PE2H4 | rna-NM_001179136.1_PE2H4 | cds-NP_011870.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:117814-119439:+ | gene-YHR006W_S288C | rna-NM_001179136.1_S288C | cds-NP_011870.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000075.1:27451-29076:- | gene-YHR006W_SA1 | rna-NM_001179136.1_SA1 | cds-NP_011870.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:107942-109567:+ | gene-YHR006W_ThermosaccDry | rna-NM_001179136.1_ThermosaccDry | cds-NP_011870.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:113490-115115:+ | gene-YHR006W_VR1 | rna-NM_001179136.1_VR1 | cds-NP_011870.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:99196-100821:+ | gene-YHR006W_ZTW1 | rna-NM_001179136.1_ZTW1 | cds-NP_011870.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:105567-107195:+ | gene-YHR006W_Sparadoxus | rna-NM_001179136.1_Sparadoxus | cds-NP_011870.1_Sparadoxus | 88.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |