Gene name: STN1
Reference locus (S288C): YDR082W
Gene biotype: protein_coding
Description: Protein STN1; Telomere end-binding and capping protein; plays a key role with Pol12p in linking telomerase action with completion of lagging strand synthesis, and in a regulatory step required for telomere capping; similar to human Stn1
Top 10 interactors (score): TEN1 (0.999); CDC13 (0.999); POL12 (0.977); RIF1 (0.962); EST1 (0.958); RIF2 (0.934); EST2 (0.922); RAP1 (0.916); EST3 (0.894); CYT1 (0.886); OCA6 (0.863); SLU7 (0.861); RTR2 (0.858); YKU80 (0.857); YDR090C (0.856); YKU70 (0.854); RRG1 (0.842); TGL2 (0.84); TBF1 (0.835); TEL1 (0.812)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:588002-589483:+ | gene-YDR082W_AKU4011 | rna-NM_001180390.1_AKU4011 | cds-NP_010367.1_AKU4011 | 98.4 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:535834-537318:- | gene-YDR082W_BG1 | rna-NM_001180390.1_BG1 | cds-NP_010367.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:620230-621711:+ | gene-YDR082W_Bruggeman | rna-NM_001180390.1_Bruggeman | cds-NP_010367.1_Bruggeman | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:603869-605353:+ | gene-YDR082W_CAT1 | rna-NM_001180390.1_CAT1 | cds-NP_010367.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:579021-580502:+ | gene-YDR082W_CBS1585 | rna-NM_001180390.1_CBS1585 | cds-NP_010367.1_CBS1585 | 98.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:604036-605520:+ | gene-YDR082W_CBS436 | rna-NM_001180390.1_CBS436 | cds-NP_010367.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:575436-576917:+ | gene-YDR082W_CBS6412 | rna-NM_001180390.1_CBS6412 | cds-NP_010367.1_CBS6412 | 98.3 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:603966-605447:+ | gene-YDR082W_CBS6413 | rna-NM_001180390.1_CBS6413 | cds-NP_010367.1_CBS6413 | 98.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:609486-610970:+ | gene-YDR082W_CENPK1137D | rna-NM_001180390.1_CENPK1137D | cds-NP_010367.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:589793-591274:+ | gene-YDR082W_EthanolRed | rna-NM_001180390.1_EthanolRed | cds-NP_010367.1_EthanolRed | 98.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:596587-598068:+ | gene-YDR082W_FaliES1 | rna-NM_001180390.1_FaliES1 | cds-NP_010367.1_FaliES1 | 98.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000358.1:33199-34683:- | gene-YDR082W_JAY291 | rna-NM_001180390.1_JAY291 | cds-NP_010367.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:604847-606328:+ | gene-YDR082W_MUCL30387 | rna-NM_001180390.1_MUCL30387 | cds-NP_010367.1_MUCL30387 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:595159-596640:+ | gene-YDR082W_MUCL30388 | rna-NM_001180390.1_MUCL30388 | cds-NP_010367.1_MUCL30388 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:580391-581872:+ | gene-YDR082W_MUCL39482 | rna-NM_001180390.1_MUCL39482 | cds-NP_010367.1_MUCL39482 | 98.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:510967-512451:+ | gene-YDR082W_MUCL42920 | rna-NM_001180390.1_MUCL42920 | cds-NP_010367.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:610364-611848:+ | gene-YDR082W_NCIM3186 | rna-NM_001180390.1_NCIM3186 | cds-NP_010367.1_NCIM3186 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:579298-580779:+ | gene-YDR082W_NCYC1407 | rna-NM_001180390.1_NCYC1407 | cds-NP_010367.1_NCYC1407 | 98.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:598765-600249:+ | gene-YDR082W_PE2H3 | rna-NM_001180390.1_PE2H3 | cds-NP_010367.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:598070-599554:+ | gene-YDR082W_PE2H4 | rna-NM_001180390.1_PE2H4 | cds-NP_010367.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:610441-611925:+ | gene-YDR082W_S288C | rna-NM_001180390.1_S288C | cds-NP_010367.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000011.1:33410-34894:- | gene-YDR082W_SA1 | rna-NM_001180390.1_SA1 | cds-NP_010367.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:596117-597598:+ | gene-YDR082W_ThermosaccDry | rna-NM_001180390.1_ThermosaccDry | cds-NP_010367.1_ThermosaccDry | 98.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:608665-610149:+ | gene-YDR082W_VR1 | rna-NM_001180390.1_VR1 | cds-NP_010367.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:593701-595182:+ | gene-YDR082W_ZTW1 | rna-NM_001180390.1_ZTW1 | cds-NP_010367.1_ZTW1 | 98.4 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:598397-599878:+ | gene-YDR082W_Sparadoxus | rna-NM_001180390.1_Sparadoxus | cds-NP_010367.1_Sparadoxus | 84.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |