Gene name: STM1
Reference locus (S288C): YLR150W
Gene biotype: protein_coding
Description: Suppressor protein STM1; Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with ribosomes; involved in TOR signaling; binds G4 quadruplex and purine motif triplex nucleic acid; helps maintain telomere structure; protein abundance increases in response to DNA replication stress; serves as a ribosome preservation factor both during quiescence and recovery
Top 10 interactors (score): RPL17A (0.987); RPS3 (0.984); RPL25 (0.983); RPL15A (0.983); RPS15 (0.983); RPL20A (0.982); RPL5 (0.982); RPS5 (0.981); RPL32 (0.979); RPS2 (0.979); RPS4A (0.979); RPS0A (0.979); RPS1A (0.977); RPL8A (0.975); RPL3 (0.975); RPL24A (0.975); RPL11A (0.974); RPL19B (0.974); RPS8B (0.973); RPS8A (0.973)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:422947-423768:+ | gene-YLR150W_AKU4011 | rna-NM_001182037.1_AKU4011 | cds-NP_013251.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:386718-387539:+ | gene-YLR150W_BG1 | rna-NM_001182037.1_BG1 | cds-NP_013251.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:434843-435664:+ | gene-YLR150W_Bruggeman | rna-NM_001182037.1_Bruggeman | cds-NP_013251.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:434225-435046:+ | gene-YLR150W_CAT1 | rna-NM_001182037.1_CAT1 | cds-NP_013251.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:430090-430911:+ | gene-YLR150W_CBS1585 | rna-NM_001182037.1_CBS1585 | cds-NP_013251.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:420327-421148:+ | gene-YLR150W_CBS436 | rna-NM_001182037.1_CBS436 | cds-NP_013251.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:428508-429329:+ | gene-YLR150W_CBS6412 | rna-NM_001182037.1_CBS6412 | cds-NP_013251.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:430355-431176:+ | gene-YLR150W_CBS6413 | rna-NM_001182037.1_CBS6413 | cds-NP_013251.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:425485-426306:+ | gene-YLR150W_CENPK1137D | rna-NM_001182037.1_CENPK1137D | cds-NP_013251.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:423148-423969:+ | gene-YLR150W_EthanolRed | rna-NM_001182037.1_EthanolRed | cds-NP_013251.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:422659-423480:+ | gene-YLR150W_FaliES1 | rna-NM_001182037.1_FaliES1 | cds-NP_013251.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000061.1:29318-30139:+ | gene-YLR150W_JAY291 | rna-NM_001182037.1_JAY291 | cds-NP_013251.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:434848-435669:+ | gene-YLR150W_MUCL30387 | rna-NM_001182037.1_MUCL30387 | cds-NP_013251.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:439648-440469:+ | gene-YLR150W_MUCL30388 | rna-NM_001182037.1_MUCL30388 | cds-NP_013251.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:430599-431420:+ | gene-YLR150W_MUCL39482 | rna-NM_001182037.1_MUCL39482 | cds-NP_013251.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:430753-431574:+ | gene-YLR150W_MUCL42920 | rna-NM_001182037.1_MUCL42920 | cds-NP_013251.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:440441-441262:+ | gene-YLR150W_NCIM3186 | rna-NM_001182037.1_NCIM3186 | cds-NP_013251.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:422871-423692:+ | gene-YLR150W_NCYC1407 | rna-NM_001182037.1_NCYC1407 | cds-NP_013251.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:428427-429248:+ | gene-YLR150W_PE2H3 | rna-NM_001182037.1_PE2H3 | cds-NP_013251.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:428168-428989:+ | gene-YLR150W_PE2H4 | rna-NM_001182037.1_PE2H4 | cds-NP_013251.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:440467-441288:+ | gene-YLR150W_S288C | rna-NM_001182037.1_S288C | cds-NP_013251.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000055.1:66364-67185:+ | gene-YLR150W_SA1 | rna-NM_001182037.1_SA1 | cds-NP_013251.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:423869-424690:+ | gene-YLR150W_ThermosaccDry | rna-NM_001182037.1_ThermosaccDry | cds-NP_013251.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:436568-437389:+ | gene-YLR150W_VR1 | rna-NM_001182037.1_VR1 | cds-NP_013251.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:421655-422476:+ | gene-YLR150W_ZTW1 | rna-NM_001182037.1_ZTW1 | cds-NP_013251.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:431823-432659:+ | gene-YLR150W_Sparadoxus | rna-NM_001182037.1_Sparadoxus | cds-NP_013251.1_Sparadoxus | 93.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |