STL1 (YDR536W)


Gene profile

Gene name: STL1
Reference locus (S288C): YDR536W
Gene biotype: protein_coding

Description: Sugar transporter STL1; Glycerol proton symporter of the plasma membrane; subject to glucose-induced inactivation, strongly but transiently induced when cells are subjected to osmotic shock

Top 10 interactors (score): HOG1 (0.94); FPS1 (0.907); HOT1 (0.813); CTT1 (0.783); GPP2 (0.766); ENA1 (0.756); PBS2 (0.754); GPP1 (0.749); GUT1 (0.719); GRE2 (0.713); SKO1 (0.7); GUT2 (0.693); HSP12 (0.679); GPD1 (0.672); SSK1 (0.634); SLN1 (0.594); FUS1 (0.591); NHA1 (0.59); SSK22 (0.573); TOK1 (0.573)

Homologues (species, bitscore): SLC2A3 (Homo sapiens, 140.6); Slc2a3 (Mus musculus, 156.4); slc2a3a (Danio rerio, 151.8); slc2a3 (Xenopus tropicalis, 160.2); Tret1-2 (Drosophila melanogaster, 134.8); hmit-1.2 (Caenorhabditis elegans, 132.1); INT1 (Arabidopsis thaliana, 157.5)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:1447598-1449307:+ gene-YDR536W_AKU4011 rna-NM_001180844.3_AKU4011 cds-NP_010825.3_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000073.1:89258-90726:+ gene-YDR536W_BG1 rna-NM_001180844.3_BG1 cds-NP_010825.3_BG1 82.6 85.9 Verified 1 1 0 False False False True False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:1480417-1482126:+ gene-YDR536W_Bruggeman rna-NM_001180844.3_Bruggeman cds-NP_010825.3_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:1456721-1458424:+ gene-YDR536W_CAT1 rna-NM_001180844.3_CAT1 cds-NP_010825.3_CAT1 94.9 99.6 Verified 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:1442326-1444035:+ gene-YDR536W_CBS1585 rna-NM_001180844.3_CBS1585 cds-NP_010825.3_CBS1585 99.9 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:1461982-1463691:+ gene-YDR536W_CBS436 rna-NM_001180844.3_CBS436 cds-NP_010825.3_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:1437490-1439199:+ gene-YDR536W_CBS6412 rna-NM_001180844.3_CBS6412 cds-NP_010825.3_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:1460986-1462695:+ gene-YDR536W_CBS6413 rna-NM_001180844.3_CBS6413 cds-NP_010825.3_CBS6413 99.9 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:1506283-1507992:+ gene-YDR536W_CENPK1137D rna-NM_001180844.3_CENPK1137D cds-NP_010825.3_CENPK1137D 99.8 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:1451136-1452845:+ gene-YDR536W_EthanolRed rna-NM_001180844.3_EthanolRed cds-NP_010825.3_EthanolRed 99.9 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:1454890-1456599:+ gene-YDR536W_FaliES1 rna-NM_001180844.3_FaliES1 cds-NP_010825.3_FaliES1 99.9 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000206.1:13471-15180:- gene-YDR536W_JAY291 rna-NM_001180844.3_JAY291 cds-NP_010825.3_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:1462499-1464208:+ gene-YDR536W_MUCL30387 rna-NM_001180844.3_MUCL30387 cds-NP_010825.3_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:1443736-1445445:+ gene-YDR536W_MUCL30388 rna-NM_001180844.3_MUCL30388 cds-NP_010825.3_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:1433823-1435532:+ gene-YDR536W_MUCL39482 rna-NM_001180844.3_MUCL39482 cds-NP_010825.3_MUCL39482 99.9 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:1376872-1378581:+ gene-YDR536W_MUCL42920 rna-NM_001180844.3_MUCL42920 cds-NP_010825.3_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:1507928-1509637:+ gene-YDR536W_NCIM3186 rna-NM_001180844.3_NCIM3186 cds-NP_010825.3_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:1447325-1449034:+ gene-YDR536W_NCYC1407 rna-NM_001180844.3_NCYC1407 cds-NP_010825.3_NCYC1407 99.9 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:1458261-1459970:+ gene-YDR536W_PE2H3 rna-NM_001180844.3_PE2H3 cds-NP_010825.3_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:1463729-1465438:+ gene-YDR536W_PE2H4 rna-NM_001180844.3_PE2H4 cds-NP_010825.3_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:1508005-1509714:+ gene-YDR536W_S288C rna-NM_001180844.3_S288C cds-NP_010825.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000004.1:107601-109310:- gene-YDR536W_SA1 rna-NM_001180844.3_SA1 cds-NP_010825.3_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:1459196-1460905:+ gene-YDR536W_ThermosaccDry rna-NM_001180844.3_ThermosaccDry cds-NP_010825.3_ThermosaccDry 99.9 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:1474649-1476358:+ gene-YDR536W_VR1 rna-NM_001180844.3_VR1 cds-NP_010825.3_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000008.1:500973-502682:+ gene-YDR536W_ZTW1 rna-NM_001180844.3_ZTW1 cds-NP_010825.3_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:1467489-1469198:+ gene-YDR536W_Sparadoxus rna-NM_001180844.3_Sparadoxus cds-NP_010825.3_Sparadoxus 90.7 100.0 Verified 1 1 1 False True False False False

Additional files