STF1 (YDL130W-A)


Gene profile

Gene name: STF1
Reference locus (S288C): YDL130W-A
Gene biotype: protein_coding

Description: ATPase-stabilizing factor 9 kDa, mitochondrial; Protein involved in regulation of the mitochondrial F1F0-ATP synthase; Stf1p and Stf2p act as stabilizing factors that enhance inhibitory action of the Inh1p protein; protein abundance increases in response to DNA replication stress; STF1 has a paralog, INH1, that arose from the whole genome duplication

Top 10 interactors (score): INH1 (0.999); STF2 (0.979); TFS1 (0.907); PNC1 (0.904); SOL4 (0.862); TMA10 (0.789); PBI2 (0.772); GLK1 (0.772); MRPL4 (0.748); GPG1 (0.742); QCR9 (0.734); GAD1 (0.733); TMA17 (0.733); NNR1 (0.733); FMP16 (0.733); DDR2 (0.732); OM14 (0.732); RTC3 (0.73); PET100 (0.67); OM45 (0.635)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:213785-214045:+ gene-YDL130W-A_AKU4011 rna-NM_001184325.1_AKU4011 cds-NP_010152.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:335920-336180:- gene-YDL130W-A_BG1 rna-NM_001184325.1_BG1 cds-NP_010152.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:230955-231215:+ gene-YDL130W-A_Bruggeman rna-NM_001184325.1_Bruggeman cds-NP_010152.1_Bruggeman 99.6 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:227958-228218:+ gene-YDL130W-A_CAT1 rna-NM_001184325.1_CAT1 cds-NP_010152.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:212050-212310:+ gene-YDL130W-A_CBS1585 rna-NM_001184325.1_CBS1585 cds-NP_010152.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:228719-228979:+ gene-YDL130W-A_CBS436 rna-NM_001184325.1_CBS436 cds-NP_010152.1_CBS436 99.6 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:210475-210735:+ gene-YDL130W-A_CBS6412 rna-NM_001184325.1_CBS6412 cds-NP_010152.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:230210-230470:+ gene-YDL130W-A_CBS6413 rna-NM_001184325.1_CBS6413 cds-NP_010152.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:227944-228204:+ gene-YDL130W-A_CENPK1137D rna-NM_001184325.1_CENPK1137D cds-NP_010152.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:224815-225075:+ gene-YDL130W-A_EthanolRed rna-NM_001184325.1_EthanolRed cds-NP_010152.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:230785-231045:+ gene-YDL130W-A_FaliES1 rna-NM_001184325.1_FaliES1 cds-NP_010152.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000010.1:846-1106:+ gene-YDL130W-A_JAY291 rna-NM_001184325.1_JAY291 cds-NP_010152.1_JAY291 99.6 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:229009-229269:+ gene-YDL130W-A_MUCL30387 rna-NM_001184325.1_MUCL30387 cds-NP_010152.1_MUCL30387 99.6 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:219773-220033:+ gene-YDL130W-A_MUCL30388 rna-NM_001184325.1_MUCL30388 cds-NP_010152.1_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:213152-213412:+ gene-YDL130W-A_MUCL39482 rna-NM_001184325.1_MUCL39482 cds-NP_010152.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:134938-135198:+ gene-YDL130W-A_MUCL42920 rna-NM_001184325.1_MUCL42920 cds-NP_010152.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:229094-229354:+ gene-YDL130W-A_NCIM3186 rna-NM_001184325.1_NCIM3186 cds-NP_010152.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:213183-213443:+ gene-YDL130W-A_NCYC1407 rna-NM_001184325.1_NCYC1407 cds-NP_010152.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:219947-220207:+ gene-YDL130W-A_PE2H3 rna-NM_001184325.1_PE2H3 cds-NP_010152.1_PE2H3 99.6 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:219951-220211:+ gene-YDL130W-A_PE2H4 rna-NM_001184325.1_PE2H4 cds-NP_010152.1_PE2H4 99.6 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:229171-229431:+ gene-YDL130W-A_S288C rna-NM_001184325.1_S288C cds-NP_010152.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000010.1:205480-205740:- gene-YDL130W-A_SA1 rna-NM_001184325.1_SA1 cds-NP_010152.1_SA1 99.6 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:230296-230556:+ gene-YDL130W-A_ThermosaccDry rna-NM_001184325.1_ThermosaccDry cds-NP_010152.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:232420-232680:+ gene-YDL130W-A_VR1 rna-NM_001184325.1_VR1 cds-NP_010152.1_VR1 99.6 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:228227-228487:+ gene-YDL130W-A_ZTW1 rna-NM_001184325.1_ZTW1 cds-NP_010152.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:230297-230557:+ gene-YDL130W-A_Sparadoxus rna-NM_001184325.1_Sparadoxus cds-NP_010152.1_Sparadoxus 91.5 100.0 Verified 1 1 1 False True False False False

Additional files