STE13 (YOR219C)


Gene profile

Gene name: STE13
Reference locus (S288C): YOR219C
Gene biotype: protein_coding

Description: Dipeptidyl aminopeptidase ste13; Dipeptidyl aminopeptidase; Golgi integral membrane protein that cleaves on the carboxyl side of repeating -X-Ala- sequences, required for maturation of alpha factor, transcription is induced by a-factor

Top 10 interactors (score): KEX2 (0.973); KEX1 (0.931); PEP1 (0.896); SNX3 (0.841); ICP55 (0.821); STE14 (0.749); MF(ALPHA)1 (0.715); VPS13 (0.714); PRC1 (0.709); MF(ALPHA)2 (0.705); VPS35 (0.697); PEP12 (0.695); AXL1 (0.661); PHO8 (0.649); STE6 (0.625); STE24 (0.612); CHC1 (0.601); VPS27 (0.594); PEP4 (0.59); AAH1 (0.582)

Homologues (species, bitscore): DPP4 (Homo sapiens, 258.8); Fap (Mus musculus, 256.5); fap (Danio rerio, 264.2); dpp4 (Xenopus tropicalis, 262.3); ome (Drosophila melanogaster, 219.9); dpf-1 (Caenorhabditis elegans, 207.2); AT5G24260 (Arabidopsis thaliana, 148.7)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:742999-745794:- gene-YOR219C_AKU4011 rna-NM_001183638.3_AKU4011 cds-NP_014862.3_AKU4011 99.1 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:145031-147826:- gene-YOR219C_BG1 rna-NM_001183638.3_BG1 cds-NP_014862.3_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:728456-731251:- gene-YOR219C_Bruggeman rna-NM_001183638.3_Bruggeman cds-NP_014862.3_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:729108-731903:- gene-YOR219C_CAT1 rna-NM_001183638.3_CAT1 cds-NP_014862.3_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:725986-728781:- gene-YOR219C_CBS1585 rna-NM_001183638.3_CBS1585 cds-NP_014862.3_CBS1585 99.1 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:724673-727468:- gene-YOR219C_CBS436 rna-NM_001183638.3_CBS436 cds-NP_014862.3_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:723105-725900:- gene-YOR219C_CBS6412 rna-NM_001183638.3_CBS6412 cds-NP_014862.3_CBS6412 99.1 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:731744-734539:- gene-YOR219C_CBS6413 rna-NM_001183638.3_CBS6413 cds-NP_014862.3_CBS6413 99.1 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:751980-754775:- gene-YOR219C_CENPK1137D rna-NM_001183638.3_CENPK1137D cds-NP_014862.3_CENPK1137D 99.6 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:719137-721932:- gene-YOR219C_EthanolRed rna-NM_001183638.3_EthanolRed cds-NP_014862.3_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:724534-727329:- gene-YOR219C_FaliES1 rna-NM_001183638.3_FaliES1 cds-NP_014862.3_FaliES1 99.2 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000381.1:99435-102230:+ gene-YOR219C_JAY291 rna-NM_001183638.3_JAY291 cds-NP_014862.3_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:731796-734591:- gene-YOR219C_MUCL30387 rna-NM_001183638.3_MUCL30387 cds-NP_014862.3_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:739213-742008:- gene-YOR219C_MUCL30388 rna-NM_001183638.3_MUCL30388 cds-NP_014862.3_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:733315-736110:- gene-YOR219C_MUCL39482 rna-NM_001183638.3_MUCL39482 cds-NP_014862.3_MUCL39482 99.1 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:742895-745690:- gene-YOR219C_MUCL42920 rna-NM_001183638.3_MUCL42920 cds-NP_014862.3_MUCL42920 99.9 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:752103-754898:- gene-YOR219C_NCIM3186 rna-NM_001183638.3_NCIM3186 cds-NP_014862.3_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:733417-736212:- gene-YOR219C_NCYC1407 rna-NM_001183638.3_NCYC1407 cds-NP_014862.3_NCYC1407 99.1 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:732806-735601:- gene-YOR219C_PE2H3 rna-NM_001183638.3_PE2H3 cds-NP_014862.3_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:743183-745978:- gene-YOR219C_PE2H4 rna-NM_001183638.3_PE2H4 cds-NP_014862.3_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:752214-755009:- gene-YOR219C_S288C rna-NM_001183638.3_S288C cds-NP_014862.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:162213-165008:- gene-YOR219C_SA1 rna-NM_001183638.3_SA1 cds-NP_014862.3_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:723719-726514:- gene-YOR219C_ThermosaccDry rna-NM_001183638.3_ThermosaccDry cds-NP_014862.3_ThermosaccDry 99.2 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:787247-790042:- gene-YOR219C_VR1 rna-NM_001183638.3_VR1 cds-NP_014862.3_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:456621-459416:- gene-YOR219C_ZTW1 rna-NM_001183638.3_ZTW1 cds-NP_014862.3_ZTW1 99.2 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:729610-732405:- gene-YOR219C_Sparadoxus rna-NM_001183638.3_Sparadoxus cds-NP_014862.3_Sparadoxus 87.9 99.9 Verified 1 1 1 False True False False False

Additional files