Gene name: STD1
Reference locus (S288C): YOR047C
Gene biotype: protein_coding
Description: Protein involved in control of glucose-regulated gene expression; interacts with kinase Snf1p, glucose sensors Snf3p and Rgt2p, TATA-binding Spt15p; regulator of transcription factor Rgt1p; interactions with Pma1p appear to propagate [GAR+]; STD1 has a paralog, MTH1, that arose from the whole genome duplication; To yeast MTH1
Top 10 interactors (score): RGT1 (0.995); SNF3 (0.963); RGT2 (0.955); SNF1 (0.871); YCK1 (0.852); PMA1 (0.84); HXT1 (0.831); CYC8 (0.807); HXT3 (0.798); GRR1 (0.796); TUP1 (0.788); MTH1 (0.778); SNF4 (0.766); MIG1 (0.752); HXT2 (0.75); HXT4 (0.749); YCK2 (0.749); MIG2 (0.741); SIP5 (0.708); HXK2 (0.695)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:400688-402022:- | gene-YOR047C_AKU4011 | rna-NM_001183466.1_AKU4011 | cds-NP_014690.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:216286-217620:- | gene-YOR047C_BG1 | rna-NM_001183466.1_BG1 | cds-NP_014690.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:403428-404762:- | gene-YOR047C_Bruggeman | rna-NM_001183466.1_Bruggeman | cds-NP_014690.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:401605-402939:- | gene-YOR047C_CAT1 | rna-NM_001183466.1_CAT1 | cds-NP_014690.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:395379-396713:- | gene-YOR047C_CBS1585 | rna-NM_001183466.1_CBS1585 | cds-NP_014690.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:399753-401087:- | gene-YOR047C_CBS436 | rna-NM_001183466.1_CBS436 | cds-NP_014690.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:394733-396067:- | gene-YOR047C_CBS6412 | rna-NM_001183466.1_CBS6412 | cds-NP_014690.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:402109-403443:- | gene-YOR047C_CBS6413 | rna-NM_001183466.1_CBS6413 | cds-NP_014690.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:416345-417679:- | gene-YOR047C_CENPK1137D | rna-NM_001183466.1_CENPK1137D | cds-NP_014690.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:397386-398720:- | gene-YOR047C_EthanolRed | rna-NM_001183466.1_EthanolRed | cds-NP_014690.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:400733-402067:- | gene-YOR047C_FaliES1 | rna-NM_001183466.1_FaliES1 | cds-NP_014690.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000035.1:71402-72736:- | gene-YOR047C_JAY291 | rna-NM_001183466.1_JAY291 | cds-NP_014690.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:408219-409553:- | gene-YOR047C_MUCL30387 | rna-NM_001183466.1_MUCL30387 | cds-NP_014690.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:411522-412856:- | gene-YOR047C_MUCL30388 | rna-NM_001183466.1_MUCL30388 | cds-NP_014690.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:402862-404196:- | gene-YOR047C_MUCL39482 | rna-NM_001183466.1_MUCL39482 | cds-NP_014690.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:417700-419034:- | gene-YOR047C_MUCL42920 | rna-NM_001183466.1_MUCL42920 | cds-NP_014690.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:416236-417570:- | gene-YOR047C_NCIM3186 | rna-NM_001183466.1_NCIM3186 | cds-NP_014690.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:409564-410898:- | gene-YOR047C_NCYC1407 | rna-NM_001183466.1_NCYC1407 | cds-NP_014690.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:408422-409756:- | gene-YOR047C_PE2H3 | rna-NM_001183466.1_PE2H3 | cds-NP_014690.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:418803-420137:- | gene-YOR047C_PE2H4 | rna-NM_001183466.1_PE2H4 | cds-NP_014690.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:416347-417681:- | gene-YOR047C_S288C | rna-NM_001183466.1_S288C | cds-NP_014690.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:384288-385622:- | gene-YOR047C_SA1 | rna-NM_001183466.1_SA1 | cds-NP_014690.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:399273-400607:- | gene-YOR047C_ThermosaccDry | rna-NM_001183466.1_ThermosaccDry | cds-NP_014690.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:400753-402087:- | gene-YOR047C_VR1 | rna-NM_001183466.1_VR1 | cds-NP_014690.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:133917-135251:- | gene-YOR047C_ZTW1 | rna-NM_001183466.1_ZTW1 | cds-NP_014690.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:406771-408105:- | gene-YOR047C_Sparadoxus | rna-NM_001183466.1_Sparadoxus | cds-NP_014690.1_Sparadoxus | 87.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |