Gene name: STB6
Reference locus (S288C): YKL072W
Gene biotype: protein_coding
Description: Protein that binds Sin3p in a two-hybrid assay; STB6 has a paralog, STB2, that arose from the whole genome duplication
Top 10 interactors (score): SIN3 (0.867); STB4 (0.811); YOR034C-A (0.749); YBL029W (0.749); YGR161W-C (0.745); YIL014C-A (0.745); DSC3 (0.745); OPI10 (0.718); DRN1 (0.711); NNR1 (0.7); MRPL32 (0.699); STB1 (0.698); INA22 (0.698); FMP10 (0.696); SPC2 (0.69); STB3 (0.674); STB5 (0.671); AQY3 (0.67); YBL029C-A (0.658); NNR2 (0.612)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:286140-288440:+ | gene-YKL072W_AKU4011 | rna-NM_001179638.1_AKU4011 | cds-NP_012851.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:356302-358602:- | gene-YKL072W_BG1 | rna-NM_001179638.1_BG1 | cds-NP_012851.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:304305-306605:+ | gene-YKL072W_Bruggeman | rna-NM_001179638.1_Bruggeman | cds-NP_012851.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:299110-301410:+ | gene-YKL072W_CAT1 | rna-NM_001179638.1_CAT1 | cds-NP_012851.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:298381-300681:+ | gene-YKL072W_CBS1585 | rna-NM_001179638.1_CBS1585 | cds-NP_012851.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:296974-299274:+ | gene-YKL072W_CBS436 | rna-NM_001179638.1_CBS436 | cds-NP_012851.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:283008-285308:+ | gene-YKL072W_CBS6412 | rna-NM_001179638.1_CBS6412 | cds-NP_012851.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:298835-301135:+ | gene-YKL072W_CBS6413 | rna-NM_001179638.1_CBS6413 | cds-NP_012851.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:299225-301525:+ | gene-YKL072W_CENPK1137D | rna-NM_001179638.1_CENPK1137D | cds-NP_012851.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:296832-299133:+ | gene-YKL072W_EthanolRed | rna-NM_001179638.1_EthanolRed | cds-NP_012851.1_EthanolRed | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:297644-299945:+ | gene-YKL072W_FaliES1 | rna-NM_001179638.1_FaliES1 | cds-NP_012851.1_FaliES1 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:119972-122272:+ | gene-YKL072W_JAY291 | rna-NM_001179638.1_JAY291 | cds-NP_012851.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:306106-308406:+ | gene-YKL072W_MUCL30387 | rna-NM_001179638.1_MUCL30387 | cds-NP_012851.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:300501-302801:+ | gene-YKL072W_MUCL30388 | rna-NM_001179638.1_MUCL30388 | cds-NP_012851.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:298166-300466:+ | gene-YKL072W_MUCL39482 | rna-NM_001179638.1_MUCL39482 | cds-NP_012851.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:302795-305095:+ | gene-YKL072W_MUCL42920 | rna-NM_001179638.1_MUCL42920 | cds-NP_012851.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:299571-301871:+ | gene-YKL072W_NCIM3186 | rna-NM_001179638.1_NCIM3186 | cds-NP_012851.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:298361-300661:+ | gene-YKL072W_NCYC1407 | rna-NM_001179638.1_NCYC1407 | cds-NP_012851.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:305451-307751:+ | gene-YKL072W_PE2H3 | rna-NM_001179638.1_PE2H3 | cds-NP_012851.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:301738-304038:+ | gene-YKL072W_PE2H4 | rna-NM_001179638.1_PE2H4 | cds-NP_012851.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:299582-301882:+ | gene-YKL072W_S288C | rna-NM_001179638.1_S288C | cds-NP_012851.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:215710-218010:+ | gene-YKL072W_SA1 | rna-NM_001179638.1_SA1 | cds-NP_012851.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:298353-300654:+ | gene-YKL072W_ThermosaccDry | rna-NM_001179638.1_ThermosaccDry | cds-NP_012851.1_ThermosaccDry | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:297711-300011:+ | gene-YKL072W_VR1 | rna-NM_001179638.1_VR1 | cds-NP_012851.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:296911-299211:+ | gene-YKL072W_ZTW1 | rna-NM_001179638.1_ZTW1 | cds-NP_012851.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:313858-316158:+ | gene-YKL072W_Sparadoxus | rna-NM_001179638.1_Sparadoxus | cds-NP_012851.1_Sparadoxus | 90.2 | 99.9 | Verified | 1 | 1 | 0 | False | False | True | False | False |