Gene name: STB4
Reference locus (S288C): YMR019W
Gene biotype: protein_coding
Description: Probable transcriptional regulatory protein STB4; Putative transcription factor; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters; binds Sin3p in a two-hybrid assay;
Top 10 interactors (score): STB6 (0.811); STB3 (0.651); CTI6 (0.635); JJJ1 (0.612); TAF4 (0.599); GCR1 (0.575); STB2 (0.573); STB5 (0.571); YAP5 (0.528); SFP1 (0.526); YLR278C (0.526); SIN3 (0.499); URC2 (0.499); AZF1 (0.481); YAP6 (0.451); SWI6 (0.451); VHR1 (0.451); VHS1 (0.451); RXT2 (0.45); ELP6 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:361761-364611:+ | gene-YMR019W_AKU4011 | rna-NM_001182515.1_AKU4011 | cds-NP_013732.1_AKU4011 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:178246-181095:- | gene-YMR019W_BG1 | rna-NM_001182515.1_BG1 | cds-NP_013732.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:301699-304549:+ | gene-YMR019W_Bruggeman | rna-NM_001182515.1_Bruggeman | cds-NP_013732.1_Bruggeman | 99.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:304214-307063:+ | gene-YMR019W_CAT1 | rna-NM_001182515.1_CAT1 | cds-NP_013732.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:294700-297550:+ | gene-YMR019W_CBS1585 | rna-NM_001182515.1_CBS1585 | cds-NP_013732.1_CBS1585 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:300244-303094:+ | gene-YMR019W_CBS436 | rna-NM_001182515.1_CBS436 | cds-NP_013732.1_CBS436 | 99.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:408104-410954:+ | gene-YMR019W_CBS6412 | rna-NM_001182515.1_CBS6412 | cds-NP_013732.1_CBS6412 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:293958-296808:+ | gene-YMR019W_CBS6413 | rna-NM_001182515.1_CBS6413 | cds-NP_013732.1_CBS6413 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:306887-309736:+ | gene-YMR019W_CENPK1137D | rna-NM_001182515.1_CENPK1137D | cds-NP_013732.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:294532-297382:+ | gene-YMR019W_EthanolRed | rna-NM_001182515.1_EthanolRed | cds-NP_013732.1_EthanolRed | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:297715-300565:+ | gene-YMR019W_FaliES1 | rna-NM_001182515.1_FaliES1 | cds-NP_013732.1_FaliES1 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:136377-139226:- | gene-YMR019W_JAY291 | rna-NM_001182515.1_JAY291 | cds-NP_013732.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:299660-302510:+ | gene-YMR019W_MUCL30387 | rna-NM_001182515.1_MUCL30387 | cds-NP_013732.1_MUCL30387 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:304085-306935:+ | gene-YMR019W_MUCL30388 | rna-NM_001182515.1_MUCL30388 | cds-NP_013732.1_MUCL30388 | 99.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:294985-297835:+ | gene-YMR019W_MUCL39482 | rna-NM_001182515.1_MUCL39482 | cds-NP_013732.1_MUCL39482 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:300800-303650:+ | gene-YMR019W_MUCL42920 | rna-NM_001182515.1_MUCL42920 | cds-NP_013732.1_MUCL42920 | 99.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:312110-314959:+ | gene-YMR019W_NCIM3186 | rna-NM_001182515.1_NCIM3186 | cds-NP_013732.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:294902-297752:+ | gene-YMR019W_NCYC1407 | rna-NM_001182515.1_NCYC1407 | cds-NP_013732.1_NCYC1407 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:300846-303695:+ | gene-YMR019W_PE2H3 | rna-NM_001182515.1_PE2H3 | cds-NP_013732.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:306941-309790:+ | gene-YMR019W_PE2H4 | rna-NM_001182515.1_PE2H4 | cds-NP_013732.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:312156-315005:+ | gene-YMR019W_S288C | rna-NM_001182515.1_S288C | cds-NP_013732.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:223261-226111:- | gene-YMR019W_SA1 | rna-NM_001182515.1_SA1 | cds-NP_013732.1_SA1 | 99.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:294784-297634:+ | gene-YMR019W_ThermosaccDry | rna-NM_001182515.1_ThermosaccDry | cds-NP_013732.1_ThermosaccDry | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:298733-301583:+ | gene-YMR019W_VR1 | rna-NM_001182515.1_VR1 | cds-NP_013732.1_VR1 | 99.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:273799-276649:+ | gene-YMR019W_ZTW1 | rna-NM_001182515.1_ZTW1 | cds-NP_013732.1_ZTW1 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:307582-310436:+ | gene-YMR019W_Sparadoxus | rna-NM_001182515.1_Sparadoxus | cds-NP_013732.1_Sparadoxus | 86.6 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |