Gene name: STB2
Reference locus (S288C): YMR053C
Gene biotype: protein_coding
Description: Protein that interacts with Sin3p in a two-hybrid assay; part of a large protein complex with Sin3p and Stb1p; STB2 has a paralog, STB6, that arose from the whole genome duplication
Top 10 interactors (score): STB1 (0.965); SIN3 (0.961); UME6 (0.908); RPD3 (0.901); UME1 (0.9); SAP30 (0.9); PHO23 (0.9); EAF3 (0.9); RXT2 (0.9); SDS3 (0.9); ASH1 (0.9); CTI6 (0.9); RCO1 (0.9); RXT3 (0.9); DEP1 (0.9); LEE1 (0.71); MOH1 (0.616); STB4 (0.573); TDA1 (0.566); STB6 (0.562)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:418074-420626:- | gene-YMR053C_AKU4011 | rna-NM_001182551.1_AKU4011 | cds-NP_013769.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:122155-124707:+ | gene-YMR053C_BG1 | rna-NM_001182551.1_BG1 | cds-NP_013769.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:360242-362794:- | gene-YMR053C_Bruggeman | rna-NM_001182551.1_Bruggeman | cds-NP_013769.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:360569-363121:- | gene-YMR053C_CAT1 | rna-NM_001182551.1_CAT1 | cds-NP_013769.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:351016-353568:- | gene-YMR053C_CBS1585 | rna-NM_001182551.1_CBS1585 | cds-NP_013769.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:356568-359120:- | gene-YMR053C_CBS436 | rna-NM_001182551.1_CBS436 | cds-NP_013769.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:464417-466969:- | gene-YMR053C_CBS6412 | rna-NM_001182551.1_CBS6412 | cds-NP_013769.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:350271-352823:- | gene-YMR053C_CBS6413 | rna-NM_001182551.1_CBS6413 | cds-NP_013769.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:374478-377030:- | gene-YMR053C_CENPK1137D | rna-NM_001182551.1_CENPK1137D | cds-NP_013769.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:350865-353417:- | gene-YMR053C_EthanolRed | rna-NM_001182551.1_EthanolRed | cds-NP_013769.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:354032-356584:- | gene-YMR053C_FaliES1 | rna-NM_001182551.1_FaliES1 | cds-NP_013769.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:80353-82905:+ | gene-YMR053C_JAY291 | rna-NM_001182551.1_JAY291 | cds-NP_013769.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:355983-358535:- | gene-YMR053C_MUCL30387 | rna-NM_001182551.1_MUCL30387 | cds-NP_013769.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:360651-363203:- | gene-YMR053C_MUCL30388 | rna-NM_001182551.1_MUCL30388 | cds-NP_013769.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:351304-353856:- | gene-YMR053C_MUCL39482 | rna-NM_001182551.1_MUCL39482 | cds-NP_013769.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:357964-360516:- | gene-YMR053C_MUCL42920 | rna-NM_001182551.1_MUCL42920 | cds-NP_013769.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:380300-382852:- | gene-YMR053C_NCIM3186 | rna-NM_001182551.1_NCIM3186 | cds-NP_013769.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:351215-353767:- | gene-YMR053C_NCYC1407 | rna-NM_001182551.1_NCYC1407 | cds-NP_013769.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:357170-359722:- | gene-YMR053C_PE2H3 | rna-NM_001182551.1_PE2H3 | cds-NP_013769.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:363265-365817:- | gene-YMR053C_PE2H4 | rna-NM_001182551.1_PE2H4 | cds-NP_013769.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:380346-382898:- | gene-YMR053C_S288C | rna-NM_001182551.1_S288C | cds-NP_013769.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:167228-169780:+ | gene-YMR053C_SA1 | rna-NM_001182551.1_SA1 | cds-NP_013769.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:351838-354390:- | gene-YMR053C_ThermosaccDry | rna-NM_001182551.1_ThermosaccDry | cds-NP_013769.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:362111-364663:- | gene-YMR053C_VR1 | rna-NM_001182551.1_VR1 | cds-NP_013769.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:330115-332667:- | gene-YMR053C_ZTW1 | rna-NM_001182551.1_ZTW1 | cds-NP_013769.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:363741-366293:- | gene-YMR053C_Sparadoxus | rna-NM_001182551.1_Sparadoxus | cds-NP_013769.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |