Gene name: STB1
Reference locus (S288C): YNL309W
Gene biotype: protein_coding
Description: Protein with role in regulation of MBF-specific transcription at Start; phosphorylated by Cln-Cdc28p kinases in vitro; unphosphorylated form binds Swi6p, which is required for Stb1p function; expression is cell-cycle regulated; STB1 has a paralog, YOL131W, that arose from the whole genome duplication
Top 10 interactors (score): SWI6 (0.998); MBP1 (0.995); SWI4 (0.992); WHI5 (0.988); NRM1 (0.973); CDC28 (0.966); STB2 (0.965); ASH1 (0.955); SIN3 (0.948); UME6 (0.94); RPD3 (0.917); UME1 (0.913); PHO23 (0.906); RCO1 (0.906); EAF3 (0.905); SDS3 (0.904); CTI6 (0.9); RXT3 (0.9); RXT2 (0.9); SAP30 (0.9)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:46460-47722:+ | gene-YNL309W_AKU4011 | rna-NM_001183147.1_AKU4011 | cds-NP_014090.2_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000074.1:42919-44181:- | gene-YNL309W_BG1 | rna-NM_001183147.1_BG1 | cds-NP_014090.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:55799-57061:+ | gene-YNL309W_Bruggeman | rna-NM_001183147.1_Bruggeman | cds-NP_014090.2_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:58414-59676:+ | gene-YNL309W_CAT1 | rna-NM_001183147.1_CAT1 | cds-NP_014090.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:46792-48054:+ | gene-YNL309W_CBS1585 | rna-NM_001183147.1_CBS1585 | cds-NP_014090.2_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:47284-48546:+ | gene-YNL309W_CBS436 | rna-NM_001183147.1_CBS436 | cds-NP_014090.2_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:43451-44713:+ | gene-YNL309W_CBS6412 | rna-NM_001183147.1_CBS6412 | cds-NP_014090.2_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:43640-44902:+ | gene-YNL309W_CBS6413 | rna-NM_001183147.1_CBS6413 | cds-NP_014090.2_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:46489-47751:+ | gene-YNL309W_CENPK1137D | rna-NM_001183147.1_CENPK1137D | cds-NP_014090.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:43482-44744:+ | gene-YNL309W_EthanolRed | rna-NM_001183147.1_EthanolRed | cds-NP_014090.2_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:44381-45643:+ | gene-YNL309W_FaliES1 | rna-NM_001183147.1_FaliES1 | cds-NP_014090.2_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000390.1:9874-11136:- | gene-YNL309W_JAY291 | rna-NM_001183147.1_JAY291 | cds-NP_014090.2_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:56054-57316:+ | gene-YNL309W_MUCL30387 | rna-NM_001183147.1_MUCL30387 | cds-NP_014090.2_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:49085-50347:+ | gene-YNL309W_MUCL30388 | rna-NM_001183147.1_MUCL30388 | cds-NP_014090.2_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:44428-45690:+ | gene-YNL309W_MUCL39482 | rna-NM_001183147.1_MUCL39482 | cds-NP_014090.2_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:46120-47382:+ | gene-YNL309W_MUCL42920 | rna-NM_001183147.1_MUCL42920 | cds-NP_014090.2_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:52631-53893:+ | gene-YNL309W_NCIM3186 | rna-NM_001183147.1_NCIM3186 | cds-NP_014090.2_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:45760-47022:+ | gene-YNL309W_NCYC1407 | rna-NM_001183147.1_NCYC1407 | cds-NP_014090.2_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:42962-44224:+ | gene-YNL309W_PE2H3 | rna-NM_001183147.1_PE2H3 | cds-NP_014090.2_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:42350-43612:+ | gene-YNL309W_PE2H4 | rna-NM_001183147.1_PE2H4 | cds-NP_014090.2_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:52662-53924:+ | gene-YNL309W_S288C | rna-NM_001183147.1_S288C | cds-NP_014090.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000052.1:43304-44566:- | gene-YNL309W_SA1 | rna-NM_001183147.1_SA1 | cds-NP_014090.2_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:45238-46500:+ | gene-YNL309W_ThermosaccDry | rna-NM_001183147.1_ThermosaccDry | cds-NP_014090.2_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:57777-59039:+ | gene-YNL309W_VR1 | rna-NM_001183147.1_VR1 | cds-NP_014090.2_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000029.1:36452-37714:+ | gene-YNL309W_ZTW1 | rna-NM_001183147.1_ZTW1 | cds-NP_014090.2_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:54448-55749:+ | gene-YNL309W_Sparadoxus | rna-NM_001183147.1_Sparadoxus | cds-NP_014090.2_Sparadoxus | 87.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |